RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 HOXA11P31270 313 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 BCAR1P56945 870 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 MBTD1Q05BQ5 628 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 NCBP1Q09161 790 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 TMEM132AQ24JP5 1023 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 NOMO2Q5JPE7 1267 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 TCF25Q9BQ70 676 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 RAB34Q9BZG1 259 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 TLE6Q9H808 572 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 DDX19AQ9NUU7 478 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 TBC1D13Q9NVG8 400 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 SPG21Q9NZD8 308 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 DBR1Q9UK59 544 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 HES2Q9Y543 173 aa15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-204ENST00000565023 MUC6Q6W4X9 2439 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 E9PMD0 336 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 TBX10O75333 385 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 POMCP01189 267 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 ITGA4P13612 1032 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 LTBRP36941 435 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 ALDH7A1P49419 539 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 KRT17Q04695 432 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 UBE3AQ05086 875 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 IL17AQ16552 155 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 NOTUMQ6P988 496 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 AGMOQ6ZNB7 445 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 SLC39A11Q8N1S5 342 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 MCPH1Q8NEM0 835 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 URGCPQ8TCY9 931 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 BSNDQ8WZ55 320 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 PLIN2Q99541 437 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 TRIM6Q9C030 488 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 BHMT2Q9H2M3 363 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 NRDE2Q9H7Z3 1164 aa15.1■□□□□ 0.01
VPS9D1-204ENST00000565023 NCK2O43639 380 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 ZNF623O75123 536 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 NPTXRO95502 500 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 ARF4P18085 180 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 SYT1P21579 422 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 SSTR3P32745 418 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 PPM1AP35813 382 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 ADAM15Q13444 863 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 KRT79Q5XKE5 535 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 LLGL2Q6P1M3 1020 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 ZNF280BQ86YH2 543 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 ZBTB8OSQ8IWT0 167 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 SMG8Q8ND04 991 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 TMEM169Q96HH4 297 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 FAM193BQ96PV7 902 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 IPPQ9Y573 584 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 MYH11P35749 1972 aa15.09■□□□□ 0.01
VPS9D1-204ENST00000565023 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 GRXCR2A6NFK2 248 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 B4GALT3O60512 393 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 DDHD2O94830 711 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
VPS9D1-204ENST00000565023 CYP11B2P19099 503 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 AXLP30530 894 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 SLC11A1P49279 550 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 PLCB3Q01970 1234 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 AMHR2Q16671 573 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 CTC1Q2NKJ3 1217 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
VPS9D1-204ENST00000565023 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 DEPTORQ8TB45 409 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 KIFC3Q9BVG8 833 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 CSRNP2Q9H175 543 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 CD207Q9UJ71 328 aa15.08■□□□□ 0
VPS9D1-204ENST00000565023 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
VPS9D1-204ENST00000565023 HIDE1A8MVS5 230 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 LAD1O00515 517 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 FSCN2O14926 492 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 GLP2RO95838 553 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
VPS9D1-204ENST00000565023 AKAP5P24588 427 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 MLH1P40692 756 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 ATP2C1P98194 919 aaPredicted RBP15.07■□□□□ 0
VPS9D1-204ENST00000565023 POU5F1BQ06416 359 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 PDIA5Q14554 519 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 IFNLR1Q8IU57 520 aaPredicted RBP15.07■□□□□ 0
VPS9D1-204ENST00000565023 EFHBQ8N7U6 833 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 BCL7CQ8WUZ0 217 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms