RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZBTB42B2RXF5 422 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 MMP3P08254 477 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 TNNT1P13805 278 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 TMOD1P28289 359 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 GTF2H1P32780 548 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 KRT83P78385 493 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 CDCA2Q69YH5 1023 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-210ENST00000564587 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-210ENST00000564587 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 PCIF1Q9H4Z3 704 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-210ENST00000564587 ADGRG1Q9Y653 693 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 SIP14410 1827 aa16.95■□□□□ 0.3
COMMD4-210ENST00000564587 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-210ENST00000564587 RRN3P2A6NIE6 340 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 A6NJR5 290 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 ANKRD63C9JTQ0 380 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 H3BRB1 525 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 EXTL3O43909 919 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 INSRRP14616 1297 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 PON1P27169 355 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 ADSSP30520 456 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 LAMTOR4Q0VGL1 99 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 CAPSQ13938 189 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
COMMD4-210ENST00000564587 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 SFMBT2Q5VUG0 894 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 WDR59Q6PJI9 974 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 TAS1R3Q7RTX0 852 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 TXLNBQ8N3L3 684 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 BAP1Q92560 729 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 C16orf70Q9BSU1 422 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
COMMD4-210ENST00000564587 NFKBIZQ9BYH8 718 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 GANQ9H2C0 597 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 IKZF4Q9H2S9 585 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 TUT1Q9H6E5 874 aaKnown RBP16.94■□□□□ 0.3
COMMD4-210ENST00000564587 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 GNEQ9Y223 722 aaKnown RBP16.94■□□□□ 0.3
COMMD4-210ENST00000564587 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
COMMD4-210ENST00000564587 SSU72P8A0A1W2PR75 194 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 ZNF233A6NK53 670 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 NOL4O94818 638 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 NDUFA10O95299 355 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 IGHA2P01877 340 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-210ENST00000564587 CYP2B6P20813 491 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 CPT1AP50416 773 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 TERF1P54274 439 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 POLR2FP61218 127 aaKnown RBP16.93■□□□□ 0.3
COMMD4-210ENST00000564587 CDC42EP1Q00587 391 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 MYL7Q01449 175 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 MAPK6Q16659 721 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 TMEM63BQ5T3F8 832 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 GJC2Q5T442 439 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-210ENST00000564587 EFCAB12Q6NXP0 572 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 REXO1L1PQ8IX06 675 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 CCDC155Q8N6L0 562 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 RDH13Q8NBN7 331 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 PRIMPOLQ96LW4 560 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 C16orf45Q96MC5 204 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-210ENST00000564587 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 AP5M1Q9H0R1 490 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 RNPEPQ9H4A4 650 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 BZW2Q9Y6E2 419 aaKnown RBP16.93■□□□□ 0.3
COMMD4-210ENST00000564587 MGAMO43451 1857 aa16.93■□□□□ 0.3
COMMD4-210ENST00000564587 LRRC53A6NM62 1247 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 EIF3CLB5ME19 914 aaKnown RBP16.92■□□□□ 0.3
COMMD4-210ENST00000564587 C22orf31O95567 290 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 SERPING1P05155 500 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 CCDC172P0C7W6 258 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 UCHL3P15374 230 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 ANXA13P27216 316 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-210ENST00000564587 KIF22Q14807 665 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 DEFB115Q30KQ5 88 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 MFSD14CQ5VZR4 134 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 SLC39A4Q6P5W5 647 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 ZNF662Q6ZS27 426 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 EIF3CQ99613 913 aaKnown RBP16.92■□□□□ 0.3
COMMD4-210ENST00000564587 CHP1Q99653 195 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 NHEJ1Q9H9Q4 299 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-210ENST00000564587 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 AIPL1Q9NZN9 384 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 USP20Q9Y2K6 914 aa16.92■□□□□ 0.3
COMMD4-210ENST00000564587 TISP43B9A030 160 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 EPHB6O15197 1021 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 DYNC1LI2O43237 492 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-210ENST00000564587 KPNA6O60684 536 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 SLC9A1P19634 815 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms