RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 NT5DC1Q5TFE4 455 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 RRAGBQ5VZM2 374 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 TWF2Q6IBS0 349 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 AGMOQ6ZNB7 445 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 LRRC55Q6ZSA7 311 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 CDR2LQ86X02 465 aaPredicted RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 CMTR2Q8IYT2 770 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 SMG8Q8ND04 991 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 KCNG4Q8TDN1 519 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 ARNTL2Q8WYA1 636 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 LARP4BQ92615 738 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 LPPQ93052 612 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 TGS1Q96RS0 853 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 TIPINQ9BVW5 301 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 C2orf40Q9H1Z8 148 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 DACT1Q9NYF0 836 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 KCND2Q9NZV8 630 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 ARHGAP28Q9P2N2 729 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 CFAP45Q9UL16 551 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 MTUS1Q9ULD2 1270 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 LRFN2Q9ULH4 789 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 PCDHB2Q9Y5E7 798 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
UBR1-204ENST00000563239 UNC80Q8N2C7 3258 aa9.44□□□□□ -0.9
UBR1-204ENST00000563239 FNDC1Q4ZHG4 1894 aaPredicted RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 CNTNAP2Q9UHC6 1331 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 MYMKA6NI61 221 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 TBKBP1A7MCY6 615 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 ACKR2O00590 384 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 ERLIN2O94905 339 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PRKCBP05771 671 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PLS3P13797 630 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 AXLP30530 894 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 BTG3Q14201 252 aaPredicted RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 PPP2R5AQ15172 486 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 LONRF3Q496Y0 759 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PAN2Q504Q3 1202 aaKnown RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 RESP18Q5W5W9 173 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 EEF1DP3Q658K8 133 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 ZBTB8OSQ8IWT0 167 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 TMEM192Q8IY95 271 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 FIBCD1Q8N539 461 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PDILTQ8N807 584 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 TMEM161BQ8NDZ6 487 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 DEPTORQ8TB45 409 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 KCNN1Q92952 543 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 DNAJC19Q96DA6 116 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 FIZ1Q96SL8 496 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 PDZD7Q9H5P4 517 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 CWH43Q9H720 699 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 C17orf75Q9HAS0 396 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 TYW1Q9NV66 732 aaKnown RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
UBR1-204ENST00000563239 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
UBR1-204ENST00000563239 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
UBR1-204ENST00000563239 CCDC169A6NNP5 214 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 C5orf67F2Z3F1 127 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 SLC16A4O15374 487 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 B4GALT3O60512 393 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 OFD1O75665 1012 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
UBR1-204ENST00000563239 SKIP12755 728 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
UBR1-204ENST00000563239 BMPR1AP36894 532 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 TXLNAP40222 546 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 ME1P48163 572 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 RAB27AP51159 221 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 EFNA5P52803 228 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 NCKAP1LP55160 1127 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 KRT85P78386 507 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 MAPK6Q16659 721 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 NOTUMQ6P988 496 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 CCDC73Q6ZRK6 1079 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 RASSF8Q8NHQ8 419 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 HELQQ8TDG4 1101 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 GDPD5Q8WTR4 605 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 PTPRHQ9HD43 1115 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 KMT5AQ9NQR1 393 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 HES2Q9Y543 173 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 IPPQ9Y573 584 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 MTCH2Q9Y6C9 303 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 KIAA1671Q9BY89 1806 aa9.42□□□□□ -0.9
UBR1-204ENST00000563239 XIRP2A4UGR9 3374 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms