RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 BAP1Q92560 729 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 ZNF215Q9UL58 517 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-208ENST00000563220 MAPK13O15264 365 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 ADRB2P07550 413 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 ACTN1P12814 892 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 SCP2P22307 547 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 PON1P27169 355 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 FMO5P49326 533 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 MEA1Q16626 185 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 EXOC3L4Q17RC7 722 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CBWD6Q4V339 395 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CBWD3Q5JTY5 395 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CBWD5Q5RIA9 395 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 CYP26C1Q6V0L0 522 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 INTS8Q75QN2 995 aaKnown RBP19.69■□□□□ 0.74
COMMD4-208ENST00000563220 TLK2Q86UE8 772 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 RHPN2Q8IUC4 686 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 RNF149Q8NC42 400 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 FBXL18Q96ME1 805 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 EDEM3Q9BZQ6 932 aa19.69■□□□□ 0.74
COMMD4-208ENST00000563220 PIGRP01833 764 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 KRT13P13646 458 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 GARTP22102 1010 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 LIG4P49917 911 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 APLP1P51693 650 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 VAMP7P51809 220 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 MCCD1P59942 119 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-208ENST00000563220 C1orf220Q5T0J3 134 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 CDCA2Q69YH5 1023 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-208ENST00000563220 LINC01465Q8N7H1 131 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 TRPV1Q8NER1 839 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 ZNF668Q96K58 619 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-208ENST00000563220 PPP1R13BQ96KQ4 1090 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 TARS2Q9BW92 718 aaKnown RBP19.68■□□□□ 0.74
COMMD4-208ENST00000563220 GANQ9H2C0 597 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 R3HCC1Q9Y3T6 440 aaKnown RBP19.68■□□□□ 0.74
COMMD4-208ENST00000563220 STYXL1Q9Y6J8 313 aa19.68■□□□□ 0.74
COMMD4-208ENST00000563220 GTPBP10A4D1E9 387 aaKnown RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 FLT3LGP49771 235 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 POLR2FP61218 127 aaKnown RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 SNRNP35Q16560 246 aaKnown RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 TSR1Q2NL82 804 aaKnown RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 GBP6Q6ZN66 633 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 RRAGAQ7L523 313 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 ZBTB45Q96K62 511 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 DESI2Q9BSY9 194 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 HAPLN2Q9GZV7 340 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 CCDC113Q9H0I3 377 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 NLRC4Q9NPP4 1024 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 PPP2R2CQ9Y2T4 447 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 TTLL13PA6NNM8 815 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 MAGEB2O15479 319 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 HNRNPH3P31942 346 aaKnown RBP19.67■□□□□ 0.74
COMMD4-208ENST00000563220 REXO1L1PQ8IX06 675 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 TRIB2Q92519 343 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 KAT2BQ92831 832 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 PLCB1Q9NQ66 1216 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 CEP72Q9P209 647 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 PLAGL2Q9UPG8 496 aa19.67■□□□□ 0.74
COMMD4-208ENST00000563220 PHLPP2Q6ZVD8 1323 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 COL1A2P08123 1366 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 LRRC53A6NM62 1247 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 EFNA5P52803 228 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 PRKCZQ05513 592 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 PPP3CAQ08209 521 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 MARCH8Q5T0T0 291 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 KLHDC7AQ5VTJ3 777 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 MTHFD1LQ6UB35 978 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 REM2Q8IYK8 340 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-208ENST00000563220 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-208ENST00000563220 C16orf45Q96MC5 204 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-208ENST00000563220 SIX2Q9NPC8 291 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 GCNT4Q9P109 453 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 Q9Y3F1 56 aa19.66■□□□□ 0.74
COMMD4-208ENST00000563220 RRP9O43818 475 aaKnown RBP19.65■□□□□ 0.74
COMMD4-208ENST00000563220 MSCO60682 206 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 PPFIA1Q13136 1202 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 GRIK4Q16099 956 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 GPD1LQ8N335 351 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 MFSD14AQ96MC6 490 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 NLRP4Q96MN2 994 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 ADGRG1Q9Y653 693 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 ASAP2O43150 1006 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 BEX3Q00994 111 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 SP3Q02447 781 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 NYAP1Q6ZVC0 841 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 ZBTB8OSQ8IWT0 167 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 FAM213AQ9BRX8 229 aa19.65■□□□□ 0.74
COMMD4-208ENST00000563220 ZNHIT6Q9NWK9 470 aaKnown RBP19.65■□□□□ 0.74
COMMD4-208ENST00000563220 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.74
COMMD4-208ENST00000563220 F2P00734 622 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 UCHL3P15374 230 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 TFDP1Q14186 410 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 DNTTIP2Q5QJE6 756 aaKnown RBP19.64■□□□□ 0.73
COMMD4-208ENST00000563220 GPIHBP1Q8IV16 184 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 PARD3BQ8TEW8 1205 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 PPP1R13LQ8WUF5 828 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 AP5M1Q9H0R1 490 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms