RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GPRC5CQ9NQ84 441 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 RCOR1Q9UKL0 485 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 PCDHA11Q9Y5I1 949 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 LOXHD1Q8IVV2 1947 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 TMEM265A0A087WTH1 108 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 C9IYK1 514 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 CSDE1O75534 798 aaKnown RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 AMHP03971 560 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 RABGGTBP53611 331 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 TTC3P53804 2025 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 FAM189BP81408 668 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 MAPK7Q13164 816 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 KARSQ15046 597 aaKnown RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 NAALADL2Q58DX5 795 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 TMCO2Q7Z6W1 182 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 DAW1Q8N136 415 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 RNF149Q8NC42 400 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 SYMPKQ92797 1274 aaKnown RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 CALML4Q96GE6 196 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 TRAIPQ9BWF2 469 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 POLR3FQ9H1D9 316 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 RGS18Q9NS28 235 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 KCND2Q9NZV8 630 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 CFAP45Q9UL16 551 aa6.86□□□□□ -1.31
CNOT1-204ENST00000563130 YBX2Q9Y2T7 364 aaKnown RBP6.86□□□□□ -1.31
CNOT1-204ENST00000563130 PLA2G4BP0C869 781 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 SRGAP2CP0DJJ0 459 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 MYOGP15173 224 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 PLCG1P19174 1290 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 FGFR4P22455 802 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 TFDP1Q14186 410 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 PCBP1Q15365 356 aaKnown RBP eCLIP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ZRSR1Q15695 479 aaKnown RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 RAB30Q15771 203 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 FOXD4L6Q3SYB3 417 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 FOXD4L3Q6VB84 417 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 MYOCDQ8IZQ8 938 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 KCNG4Q8TDN1 519 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 CDK5RAP3Q96JB5 506 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 CHAMP1Q96JM3 812 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 PLIN2Q99541 437 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 RAD9AQ99638 391 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ADAM2Q99965 735 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 RUSC1Q9BVN2 902 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 TTYH1Q9H313 450 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 CHST12Q9NRB3 414 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 C1orf112Q9NSG2 853 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 COL4A6Q14031 1691 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 A0A087X0B3 334 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 CUTAO60888 179 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 HOXA11P31270 313 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 PHKA2P46019 1235 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 NUCB2P80303 420 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 MBTD1Q05BQ5 628 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ARSHQ5FYA8 562 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 SHC4Q6S5L8 630 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 SLC24A5Q71RS6 500 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 MAEAQ7L5Y9 396 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 RAD54LQ92698 747 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 KIFAP3Q92845 792 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 TIFAQ96CG3 184 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF689Q96CS4 500 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 SCLT1Q96NL6 688 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 TIPINQ9BVW5 301 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ELAC1Q9H777 363 aaKnown RBP6.85□□□□□ -1.31
CNOT1-204ENST00000563130 C17orf75Q9HAS0 396 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 AGPAT5Q9NUQ2 364 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 STK17AQ9UEE5 414 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 PCDHA7Q9UN72 937 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 INSL6Q9Y581 213 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ATP6V1DQ9Y5K8 247 aa6.85□□□□□ -1.31
CNOT1-204ENST00000563130 ADGRA3Q8IWK6 1321 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 A0A0U1RQF3 1178 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 LCHNA4D1U4 455 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 TLL1O43897 1013 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 DGKIO75912 1065 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CA3P07451 260 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 NAMPTP43490 491 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 SARSP49591 514 aaKnown RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 KRT85P78386 507 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 FAM187BQ17R55 369 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 PUS10Q3MIT2 529 aaKnown RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CATSPER4Q7RTX7 472 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 LARP4BQ92615 738 aaKnown RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 KCNN1Q92952 543 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 NTPCRQ9BSD7 190 aaKnown RBP6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CCDC113Q9H0I3 377 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 KDM4CQ9H3R0 1056 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 FZD8Q9H461 694 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 POLD4Q9HCU8 107 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 CCDC39Q9UFE4 941 aa6.84□□□□□ -1.31
CNOT1-204ENST00000563130 MSRAQ9UJ68 235 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms