RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 TRIM23P36406 574 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CAP2P40123 477 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 SLC26A3P40879 764 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 UBA7P41226 1012 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GSSP48637 474 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 KRT6CP48668 564 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GALK1P51570 392 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 BCAP31P51572 246 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 HNRNPFP52597 415 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 S100A12P80511 92 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TMF1P82094 1093 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 PPP2R2BQ00005 443 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 KRT76Q01546 638 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GUCY2DQ02846 1103 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CETN1Q12798 172 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TBX2Q13207 712 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 IDI1Q13907 227 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
TCF4-215ENST00000562638 HLTFQ14527 1009 aaKnown RBP eCLIP5.29□□□□□ -1.56
TCF4-215ENST00000562638 SEMA3AQ14563 771 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CYTH1Q15438 398 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TGFBIQ15582 683 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 HERC4Q5GLZ8 1057 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 HYIQ5T013 277 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RASIP1Q5U651 963 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FYB2Q5VWT5 728 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TTBK2Q6IQ55 1244 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 C4orf22Q6V702 233 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MARK2Q7KZI7 788 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TAS1R3Q7RTX0 852 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TRPM8Q7Z2W7 1104 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CYP2U1Q7Z449 544 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FAM124AQ86V42 546 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MMAAQ8IVH4 418 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 ARHGAP24Q8N264 748 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MREGQ8N565 214 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ARFGAP2Q8N6H7 521 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ATP6V0D2Q8N8Y2 350 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FAM133AQ8N9E0 248 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RBBP8NLQ8NC74 664 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 BBOF1Q8ND07 529 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FLCNQ8NFG4 579 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 NKX2-3Q8TAU0 364 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FBF1Q8TES7 1133 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FBXO41Q8TF61 875 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 PYROXD1Q8WU10 500 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 UCMAQ8WVF2 138 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TTC17Q96AE7 1141 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ARL8AQ96BM9 186 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 SGK3Q96BR1 496 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ZNF274Q96GC6 653 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 COX4I2Q96KJ9 171 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ZSCAN31Q96LW9 406 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 BCL2L13Q9BXK5 485 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MRPL1Q9BYD6 325 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 PPP1R12CQ9BZL4 782 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TRIM8Q9BZR9 551 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CDH19Q9H159 772 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TUT1Q9H6E5 874 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 C8orf33Q9H7E9 229 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 IFT22Q9H7X7 185 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 UCK1Q9HA47 277 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 C12orf4Q9NQ89 552 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CNGB3Q9NQW8 809 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GIN1Q9NXP7 522 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 SLC39A1Q9NY26 324 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ABI2Q9NYB9 513 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 GGA3Q9NZ52 723 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TRPM5Q9NZQ8 1165 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GMIPQ9P107 970 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FNIP2Q9P278 1114 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TNFRSF10DQ9UBN6 386 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MTRF1LQ9UGC7 380 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 ANAPC5Q9UJX4 755 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 HDAC9Q9UKV0 1011 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 IFT52Q9Y366 437 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 TUBGCP6Q96RT7 1819 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CARMIL2Q6F5E8 1435 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MYO5CQ9NQX4 1742 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 ZNF804BA4D1E1 1349 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 RNF17Q9BXT8 1623 aaKnown RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 CCDC163A0A0D9SF12 145 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 FUOMA2VDF0 154 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 SYCE1LA8MT33 242 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 RSPH10B2B2RC85 870 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 F8W031 263 aaPredicted RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 TLR3O15455 904 aaKnown RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 RNMTO43148 476 aaKnown RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 STX6O43752 255 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 LILRB3O75022 631 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 TCEA3O75764 348 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 ARHGEF15O94989 841 aa5.28□□□□□ -1.56
TCF4-215ENST00000562638 POP4O95707 220 aaKnown RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 DDX58O95786 925 aaKnown RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 ITGBL1O95965 494 aaPredicted RBP5.28□□□□□ -1.56
TCF4-215ENST00000562638 ITGB3P05106 788 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms