RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
FANCA-209ENST00000562424 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
FANCA-209ENST00000562424 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.37
FANCA-209ENST00000562424 POLR3FQ9H1D9 316 aaPredicted RBP12.77□□□□□ -0.37
FANCA-209ENST00000562424 MYH11P35749 1972 aa12.77□□□□□ -0.37
FANCA-209ENST00000562424 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
FANCA-209ENST00000562424 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
FANCA-209ENST00000562424 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 GRM6O15303 877 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 SKIP12755 728 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 CYP11B2P19099 503 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
FANCA-209ENST00000562424 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
FANCA-209ENST00000562424 CLLU1OSQ5K130 101 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
FANCA-209ENST00000562424 SNX21Q969T3 373 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 NFKBIZQ9BYH8 718 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 LMAN2LQ9H0V9 348 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
FANCA-209ENST00000562424 KIAA1024Q9UPX6 916 aa12.76□□□□□ -0.37
FANCA-209ENST00000562424 ZNF623O75123 536 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 ERLIN2O94905 339 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 SYT1P21579 422 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 CDC25AP30304 524 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 HOXA11P31270 313 aaPredicted RBP12.75□□□□□ -0.37
FANCA-209ENST00000562424 RAB27AP51159 221 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 KCNQ1P51787 676 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 MBTD1Q05BQ5 628 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 TIGD5Q53EQ6 642 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 MAEAQ7L5Y9 396 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 ABI1Q8IZP0 508 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
FANCA-209ENST00000562424 FAM122AQ96E09 287 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 MMTAG2Q9BU76 263 aaKnown RBP12.75□□□□□ -0.37
FANCA-209ENST00000562424 BHMT2Q9H2M3 363 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 CWH43Q9H720 699 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 FAM105AQ9NUU6 356 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 TYW1Q9NV66 732 aaKnown RBP12.75□□□□□ -0.37
FANCA-209ENST00000562424 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 COG5Q9UP83 839 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 MYH15Q9Y2K3 1946 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
FANCA-209ENST00000562424 VWA3AA6NCI4 1184 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 TSPAN1O60635 241 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 EYA4O95677 639 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 BMP15O95972 392 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 ITGB1P05556 798 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 NUDT7P0C024 238 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 LAG3P18627 525 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 AXLP30530 894 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 AMHR2Q16671 573 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 HYIQ5T013 277 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
FANCA-209ENST00000562424 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 LRRC43Q8N309 656 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 KLHL23Q8NBE8 558 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 COLGALT1Q8NBJ5 622 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 SPPL3Q8TCT6 385 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
FANCA-209ENST00000562424 ALG13Q9NP73 1137 aaKnown RBP12.74□□□□□ -0.37
FANCA-209ENST00000562424 AAASQ9NRG9 546 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
FANCA-209ENST00000562424 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
FANCA-209ENST00000562424 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 NCBP1Q09161 790 aaKnown RBP12.73□□□□□ -0.37
FANCA-209ENST00000562424 RESTQ13127 1097 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 CAMK1Q14012 370 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 UBXN11Q5T124 520 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
FANCA-209ENST00000562424 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 MRPL10Q7Z7H8 261 aaKnown RBP12.73□□□□□ -0.37
FANCA-209ENST00000562424 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 LPPQ93052 612 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 HLA-CQ95604 372 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 CCDC51Q96ER9 411 aa12.73□□□□□ -0.37
FANCA-209ENST00000562424 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
FANCA-209ENST00000562424 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 E9PMD0 336 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 ARF4P18085 180 aaPredicted RBP12.72□□□□□ -0.37
FANCA-209ENST00000562424 DNAJB1P25685 340 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 NAMPTP43490 491 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 UBE3AQ05086 875 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
FANCA-209ENST00000562424 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
FANCA-209ENST00000562424 GLB1LQ6UWU2 654 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms