RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 KCNK18Q7Z418 384 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 ZNF280BQ86YH2 543 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 RABGGTAQ92696 567 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TCF25Q9BQ70 676 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 NRDE2Q9H7Z3 1164 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 CD320Q9NPF0 282 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TLR9Q9NR96 1032 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TBC1D13Q9NVG8 400 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 KLK14Q9P0G3 267 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 VWA3AA6NCI4 1184 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 GAS2O43903 313 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 DDHD2O94830 711 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 EDN1P05305 212 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 ITGA4P13612 1032 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 ARF4P18085 180 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 AKAP5P24588 427 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 SLC11A1P49279 550 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 MCM2P49736 904 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 RAD51AP2Q09MP3 1159 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 AMHR2Q16671 573 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 NAALADL2Q58DX5 795 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 FAM173BQ6P4H8 233 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 GLB1LQ6UWU2 654 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 DTHD1Q6ZMT9 781 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 SLC39A11Q8N1S5 342 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 SMG8Q8ND04 991 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 VN1R2Q8NFZ6 395 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 MRPS27Q92552 414 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 PGBD4Q96DM1 585 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 GAD1Q99259 594 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 NXF3Q9H4D5 531 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 RSAD1Q9HA92 442 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 MIOSQ9NXC5 875 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 SPG21Q9NZD8 308 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 CACNG4Q9UBN1 327 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 PRG3Q9Y2Y8 225 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 IPPQ9Y573 584 aa10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-203ENST00000562039 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 SFI1A8K8P3 1242 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 F8W810 466 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 GLP2RO95838 553 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 MYBP10242 640 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 XRCC6P12956 609 aaKnown RBP eCLIP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 CYP11B2P19099 503 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 MLH1P40692 756 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 ALDH7A1P49419 539 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 RAB27AP51159 221 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 SCNN1GP51170 649 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 GRIN1Q05586 938 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 ORC2Q13416 577 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 ADAM15Q13444 863 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 KRT79Q5XKE5 535 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 DEPTORQ8TB45 409 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 URGCPQ8TCY9 931 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 FOXD4L4Q8WXT5 416 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 FAM193BQ96PV7 902 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 MMTAG2Q9BU76 263 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 RUSC1Q9BVN2 902 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 MRPL9Q9BYD2 267 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 TRIM6Q9C030 488 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 CSRNP2Q9H175 543 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 EPHX3Q9H6B9 360 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 CLEC1BQ9P126 229 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 PARP2Q9UGN5 583 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 PUF60Q9UHX1 559 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 CDH22Q9UJ99 828 aa10.49□□□□□ -0.73
NSMCE1-203ENST00000562039 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 CCDC169A6NNP5 214 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 FSCN2O14926 492 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 MBTPS2O43462 519 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 ZNF623O75123 536 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 CXCL14O95715 111 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 PRKCBP05771 671 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 GALTP07902 379 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 SKIP12755 728 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 NCLP19338 710 aaKnown RBP10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 OR1G1P47890 313 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 ATP2C1P98194 919 aaPredicted RBP10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 PLCB3Q01970 1234 aa10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 CEBPZQ03701 1054 aaKnown RBP10.48□□□□□ -0.73
NSMCE1-203ENST00000562039 KRT17Q04695 432 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms