RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 GPR88Q9GZN0 384 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 DPH5Q9H2P9 285 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 FBXO28Q9NVF7 368 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 UTP11Q9Y3A2 253 aaKnown RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 LSP1P33241 339 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 SNCBQ16143 134 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 MICALCLQ6ZW33 695 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 ADAT2Q7Z6V5 191 aaKnown RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 OLIG1Q8TAK6 271 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 CNKSR1Q969H4 720 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 THAP2Q9H0W7 228 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 TAS2R14Q9NYV8 317 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 BCRP11274 1271 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 CETN1Q12798 172 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 FAM228AQ86W67 206 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 GOLGB1Q14789 3259 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 UAP1Q16222 522 aaPredicted RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SYT11Q9BT88 431 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 UBE2TQ9NPD8 197 aaPredicted RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 LARSQ9P2J5 1176 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 EMSYQ7Z589 1322 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 ATXN2Q99700 1313 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 A0A1B0GUA9 196 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 ATP2C2O75185 946 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 PPP1R37O75864 691 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 FLT3P36888 993 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 PPATQ06203 517 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 DLGAP5Q15398 846 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 FAM160B2Q86V87 743 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 SLC9A9Q8IVB4 645 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 DAW1Q8N136 415 aa11.84□□□□□ -0.51
NEIL1-202ENST00000561643 C1orf131Q8NDD1 294 aaKnown RBP11.84□□□□□ -0.51
NEIL1-202ENST00000561643 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 TISP43B9A030 160 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 RFX1P22670 979 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 MDH1P40925 334 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 DLG4P78352 724 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 MAPK7Q13164 816 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ZNF211Q13398 564 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 TNIP1Q15025 636 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 C11orf91Q3C1V1 193 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 INTS8Q75QN2 995 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 TRMT1LQ7Z2T5 733 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 FAM151AQ8WW52 585 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 RIT2Q99578 217 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 TRIM51Q9BSJ1 452 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 HAUS2Q9NVX0 235 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 DIS3Q9Y2L1 958 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 NR2E1Q9Y466 385 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 KIF3CO14782 793 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 RTN2O75298 545 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ITGB5P18084 799 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 BAG6P46379 1132 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 GCLMP48507 274 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 DHX9Q08211 1270 aaKnown RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ZNF844Q08AG5 666 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 KIF22Q14807 665 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 SPRED3Q2MJR0 410 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 ODF2Q5BJF6 829 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 CYB5D1Q6P9G0 228 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 SLC20A1Q8WUM9 679 aa11.83□□□□□ -0.52
NEIL1-202ENST00000561643 NAP1L3Q99457 506 aaPredicted RBP11.83□□□□□ -0.52
NEIL1-202ENST00000561643 EPN3Q9H201 632 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms