RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.48
USB1-204ENST00000561568 ELOA2Q8IYF1 753 aaPredicted RBP18.02■□□□□ 0.48
USB1-204ENST00000561568 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 CCDC113Q9H0I3 377 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
USB1-204ENST00000561568 PIN4Q9Y237 131 aaKnown RBP18.02■□□□□ 0.48
USB1-204ENST00000561568 A0A1B0GUA9 196 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
USB1-204ENST00000561568 MGEA5O60502 916 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 TSPAN1O60635 241 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 PRKCBP05771 671 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 ATP2A2P16615 1042 aaKnown RBP18.01■□□□□ 0.47
USB1-204ENST00000561568 PRPF4BQ13523 1007 aaKnown RBP18.01■□□□□ 0.47
USB1-204ENST00000561568 CUL4BQ13620 913 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 AMHR2Q16671 573 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 NOTUMQ6P988 496 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 UNC13DQ70J99 1090 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 ZNF720Q7Z2F6 126 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 CCDC51Q96ER9 411 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 KIFC3Q9BVG8 833 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 MRPL44Q9H9J2 332 aaKnown RBP18.01■□□□□ 0.47
USB1-204ENST00000561568 OLFML3Q9NRN5 406 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
USB1-204ENST00000561568 ADGRA3Q8IWK6 1321 aa18■□□□□ 0.47
USB1-204ENST00000561568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18■□□□□ 0.47
USB1-204ENST00000561568 A0A0U1RQF3 1178 aa18■□□□□ 0.47
USB1-204ENST00000561568 C9IYK1 514 aa18■□□□□ 0.47
USB1-204ENST00000561568 KINO60870 393 aaKnown RBP18■□□□□ 0.47
USB1-204ENST00000561568 NR1I2O75469 434 aa18■□□□□ 0.47
USB1-204ENST00000561568 STAG3L1P0CL83 205 aa18■□□□□ 0.47
USB1-204ENST00000561568 ARF4P18085 180 aaPredicted RBP18■□□□□ 0.47
USB1-204ENST00000561568 LIG1P18858 919 aa18■□□□□ 0.47
USB1-204ENST00000561568 SARSP49591 514 aaKnown RBP18■□□□□ 0.47
USB1-204ENST00000561568 GTF2BQ00403 316 aa18■□□□□ 0.47
USB1-204ENST00000561568 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
USB1-204ENST00000561568 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
USB1-204ENST00000561568 SFR1Q86XK3 245 aa18■□□□□ 0.47
USB1-204ENST00000561568 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
USB1-204ENST00000561568 BLZF1Q9H2G9 400 aa18■□□□□ 0.47
USB1-204ENST00000561568 ELAC1Q9H777 363 aaKnown RBP18■□□□□ 0.47
USB1-204ENST00000561568 PCDHB7Q9Y5E2 793 aa18■□□□□ 0.47
USB1-204ENST00000561568 ZNF623O75123 536 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 EOMESO95936 686 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 RAB27AP51159 221 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 PSMD2Q13200 908 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 ALCAMQ13740 583 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 STXBP4Q6ZWJ1 553 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 APBB1IPQ7Z5R6 666 aaPredicted RBP17.99■□□□□ 0.47
USB1-204ENST00000561568 HERC6Q8IVU3 1022 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 GRAMD1CQ8IYS0 662 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 LINC01599Q8WXQ3 324 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
USB1-204ENST00000561568 FIZ1Q96SL8 496 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 ZBED2Q9BTP6 218 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 MRPL4Q9BYD3 311 aaKnown RBP17.99■□□□□ 0.47
USB1-204ENST00000561568 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 TBX20Q9UMR3 447 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 SIP14410 1827 aa17.99■□□□□ 0.47
USB1-204ENST00000561568 K7ENM7 598 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 N4BP3O15049 544 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 CASP1P29466 404 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
USB1-204ENST00000561568 DEFB103AP81534 67 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 COASYQ13057 564 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 SLC27A1Q6PCB7 646 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 CPB2Q96IY4 423 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 ADPGKQ9BRR6 497 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 TNFSF13BQ9Y275 285 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
USB1-204ENST00000561568 B4GALT5O43286 388 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 UPP2O95045 317 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 GJB5O95377 273 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
USB1-204ENST00000561568 DPYDQ12882 1025 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 POSTNQ15063 836 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 NT5DC1Q5TFE4 455 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 ATF7IP2Q5U623 682 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 ZPBP2Q6X784 338 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 TAS1R3Q7RTX0 852 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 CRIPAKQ8N1N5 446 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 RAD9AQ99638 391 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 ACO2Q99798 780 aaKnown RBP17.97■□□□□ 0.47
USB1-204ENST00000561568 STRA6Q9BX79 667 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
USB1-204ENST00000561568 FAM105AQ9NUU6 356 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 TBC1D7Q9P0N9 293 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 EXOC7Q9UPT5 735 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 INSL6Q9Y581 213 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
USB1-204ENST00000561568 KLRC4O43908 158 aa17.96■□□□□ 0.47
USB1-204ENST00000561568 SMC2O95347 1197 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms