RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ODR4Q5SWX8 454 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NT5DC1Q5TFE4 455 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 TBC1D7Q9P0N9 293 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 LARSQ9P2J5 1176 aaKnown RBP12.8□□□□□ -0.36
HERC1-214ENST00000561400 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 MYO1CO00159 1063 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 GPR32O75388 356 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 ABCD1P33897 745 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 GPC3P51654 580 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
HERC1-214ENST00000561400 KIZQ2M2Z5 673 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 RBM43Q6ZSC3 357 aaKnown RBP12.8□□□□□ -0.36
HERC1-214ENST00000561400 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 GLIS3Q8NEA6 775 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 SMARCE1Q969G3 411 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
HERC1-214ENST00000561400 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 FGFBP2Q9BYJ0 223 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 C17orf75Q9HAS0 396 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 A0A087WZ62 844 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
HERC1-214ENST00000561400 ASAP2O43150 1006 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 RHOBTB3O94955 611 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 CTSHP09668 335 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 FAM163BP0C2L3 166 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 THPOP40225 353 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 NAMPTP43490 491 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 FDXACB1Q9BRP7 624 aaPredicted RBP12.79□□□□□ -0.36
HERC1-214ENST00000561400 ADAMTS10Q9H324 1103 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 IFT122Q9HBG6 1241 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 GINS2Q9Y248 185 aa12.79□□□□□ -0.36
HERC1-214ENST00000561400 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 BIN1O00499 593 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SMC2O95347 1197 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CHRNA1P02708 482 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CKBP12277 381 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 GAP43P17677 238 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 DMP1Q13316 513 aaPredicted RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 KCNB1Q14721 858 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 RSPH3Q86UC2 560 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 OLFML3Q9NRN5 406 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 MAN1B1Q9UKM7 699 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SCN5AQ14524 2016 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SLC16A4O15374 487 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CSDE1O75534 798 aaKnown RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 BMP6P22004 513 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CASP5P51878 434 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 RBL2Q08999 1139 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 MGAT3Q09327 533 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 STK4Q13043 487 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 FAM26FQ5R3K3 315 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 TRAF7Q6Q0C0 670 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 FAM178BQ8IXR5 827 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SYAP1Q96A49 352 aaPredicted RBP12.78□□□□□ -0.36
HERC1-214ENST00000561400 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 KMT5AQ9NQR1 393 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
HERC1-214ENST00000561400 TANC1Q9C0D5 1861 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 SKILP12757 684 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 NCKAP1LP55160 1127 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 ZC2HC1CQ53FD0 456 aaPredicted RBP12.77□□□□□ -0.36
HERC1-214ENST00000561400 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 ZNF410Q86VK4 478 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 TET1Q8NFU7 2136 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 OSMRQ99650 979 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.36
HERC1-214ENST00000561400 CELF4Q9BZC1 486 aaKnown RBP12.77□□□□□ -0.36
HERC1-214ENST00000561400 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.36
HERC1-214ENST00000561400 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 ARHGAP28Q9P2N2 729 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 GDAQ9Y2T3 454 aa12.77□□□□□ -0.36
HERC1-214ENST00000561400 RPLP2P05387 115 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms