RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
USP3-219ENST00000561326 FRMPD3Q5JV73 1810 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 A0A1W2PQC6 194 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 MBLAC1A4D2B0 266 aaPredicted RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 INO80B-WBP1J3KQ70 363 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 TEX33O43247 280 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 ADAMTS4O75173 837 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 PIGRP01833 764 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 CYP2C9P11712 490 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 MATR3P43243 847 aaKnown RBP eCLIP11.26□□□□□ -0.616e-9■■□□□ 14.1
USP3-219ENST00000561326 PTENP60484 403 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 DRP2Q13474 957 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 MARCH8Q5T0T0 291 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 ZPBP2Q6X784 338 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 ZNF410Q86VK4 478 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 KIAA0319LQ8IZA0 1049 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 LINC01465Q8N7H1 131 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 KLHDC9Q8NEP7 349 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 LMBR1Q8WVP7 490 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 NLRP4Q96MN2 994 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 SCLT1Q96NL6 688 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 NUP58Q9BVL2 599 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 PRMT7Q9NVM4 692 aaPredicted RBP11.26□□□□□ -0.61
USP3-219ENST00000561326 HSPBP1Q9NZL4 362 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 PTCH2Q9Y6C5 1203 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
USP3-219ENST00000561326 ANKRD63C9JTQ0 380 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 ACKR2O00590 384 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 STX10O60499 249 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 AKAP3O75969 853 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 VTNP04004 478 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 PRKCBP05771 671 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 ASGR1P07306 291 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 ADAM17P78536 824 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 TRIM14Q14142 442 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 PCBP1Q15365 356 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP3-219ENST00000561326 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 TCERG1LQ5VWI1 586 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 INTS8Q75QN2 995 aaKnown RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 NLRP7Q8WX94 980 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 GCOM2Q9BZD3 368 aaPredicted RBP11.25□□□□□ -0.61
USP3-219ENST00000561326 PCIF1Q9H4Z3 704 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 HDAC6Q9UBN7 1215 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 ITIH6Q6UXX5 1313 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 CITO14578 2027 aa11.25□□□□□ -0.61
USP3-219ENST00000561326 A0A087WZ62 844 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 MYADML2A6NDP7 307 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 ZNF233A6NK53 670 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 CLDN3O15551 220 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 AFPP02771 609 aaKnown RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 CASP4P49662 377 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 ENPEPQ07075 957 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 FAM187BQ17R55 369 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 SLC9C1Q4G0N8 1177 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 MIIPQ5JXC2 388 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 GLT1D1Q96MS3 346 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 ERGIC2Q96RQ1 377 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 CBWD1Q9BRT8 395 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 TARS2Q9BW92 718 aaKnown RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 SEZ6LQ9BYH1 1024 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 FAM49AQ9H0Q0 323 aaPredicted RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 FZD8Q9H461 694 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 GTF2IRD1Q9UHL9 959 aa11.24□□□□□ -0.61
USP3-219ENST00000561326 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
USP3-219ENST00000561326 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms