RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CLP1Q92989 425 aaKnown RBP15.37■□□□□ 0.05
TPM1-230ENST00000561266 TYW1Q9NV66 732 aaKnown RBP15.37■□□□□ 0.05
TPM1-230ENST00000561266 PCDHA7Q9UN72 937 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 HES2Q9Y543 173 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 PCDHB2Q9Y5E7 798 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 B4GALT3O60512 393 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 ZNF623O75123 536 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 LIG1P18858 919 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 IGFBP4P22692 258 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 BMPR1AP36894 532 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 GIT2Q14161 759 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 FAM187BQ17R55 369 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 NT5DC1Q5TFE4 455 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 EEF1DP3Q658K8 133 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
TPM1-230ENST00000561266 GPBP1Q86WP2 473 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 REEP2Q9BRK0 252 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 CXCL16Q9H2A7 254 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 DACT1Q9NYF0 836 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 RCOR1Q9UKL0 485 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 MTCH2Q9Y6C9 303 aa15.36■□□□□ 0.05
TPM1-230ENST00000561266 A0A1B0GUA9 196 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 SLC16A4O15374 487 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 OFD1O75665 1012 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 ERLIN2O94905 339 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 EOMESO95936 686 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 PRKCBP05771 671 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 PDIA4P13667 645 aaKnown RBP15.35■□□□□ 0.05
TPM1-230ENST00000561266 PBX3P40426 434 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 BECN1Q14457 450 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 FAM43BQ6ZT52 329 aaPredicted RBP15.35■□□□□ 0.05
TPM1-230ENST00000561266 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 PDILTQ8N807 584 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 LARP4BQ92615 738 aaKnown RBP15.35■□□□□ 0.05
TPM1-230ENST00000561266 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 MIOSQ9NXC5 875 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 ARHGAP28Q9P2N2 729 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 IPPQ9Y573 584 aa15.35■□□□□ 0.05
TPM1-230ENST00000561266 MYMKA6NI61 221 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 C5orf67F2Z3F1 127 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 H3BNC9 293 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 GRM6O15303 877 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 CUTAO60888 179 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 NPTXRO95502 500 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 POU3F3P20264 500 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 DNAJB1P25685 340 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 CTNNB1P35222 781 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 CAMK1Q14012 370 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 CCDC85BQ15834 202 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 E2F4Q16254 413 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 RRAGBQ5VZM2 374 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 MAFAQ8NHW3 353 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 LEO1Q8WVC0 666 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 STAMQ92783 540 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 FIZ1Q96SL8 496 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 GAS2L1Q99501 681 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 TMEM117Q9H0C3 514 aa15.34■□□□□ 0.05
TPM1-230ENST00000561266 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 PRMT7Q9NVM4 692 aaPredicted RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 TDRD15B5MCY1 1934 aaKnown RBP15.34■□□□□ 0.05
TPM1-230ENST00000561266 ACKR2O00590 384 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 ITGB1P05556 798 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 PLS3P13797 630 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
TPM1-230ENST00000561266 AXLP30530 894 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 GPM6BQ13491 265 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 NOTUMQ6P988 496 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 DYMQ7RTS9 669 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 KLHL23Q8NBE8 558 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 PPM1EQ8WY54 764 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 DNAJC19Q96DA6 116 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 DRC1Q96MC2 740 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 NTPCRQ9BSD7 190 aaKnown RBP15.33■□□□□ 0.04
TPM1-230ENST00000561266 C2orf40Q9H1Z8 148 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
TPM1-230ENST00000561266 KMT5AQ9NQR1 393 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 CNTNAP2Q9UHC6 1331 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 BRWD1Q9NSI6 2320 aa15.33■□□□□ 0.04
TPM1-230ENST00000561266 ABLIM1O14639 778 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 AKAP5P24588 427 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 ZNF131P52739 623 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 PRPF4BQ13523 1007 aaKnown RBP15.32■□□□□ 0.04
TPM1-230ENST00000561266 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.044e-6■□□□□ 10.4
TPM1-230ENST00000561266 MAPK6Q16659 721 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 ZNF280BQ86YH2 543 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 MICALL1Q8N3F8 863 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 COLGALT1Q8NBJ5 622 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 ZBTB45Q96K62 511 aaPredicted RBP15.32■□□□□ 0.04
TPM1-230ENST00000561266 PRIMPOLQ96LW4 560 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 416.7 ms