RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 REXO1L1PQ8IX06 675 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 POMGNT1Q8WZA1 660 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 BICD1Q96G01 975 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 GANQ9H2C0 597 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 FLRT1Q9NZU1 646 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 SUCLA2Q9P2R7 463 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-206ENST00000561036 GNEQ9Y223 722 aaKnown RBP18.67■□□□□ 0.58
HDDC3-206ENST00000561036 ADGRG1Q9Y653 693 aa18.67■□□□□ 0.58
HDDC3-206ENST00000561036 A6NJR5 290 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 H3BRB1 525 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 C22orf31O95567 290 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 INSRRP14616 1297 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 CETN1Q12798 172 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 SNRNP35Q16560 246 aaKnown RBP18.66■□□□□ 0.58
HDDC3-206ENST00000561036 KLHDC7AQ5VTJ3 777 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 ZPBP2Q6X784 338 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 TOGARAM2Q6ZUX3 1019 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
HDDC3-206ENST00000561036 RRAGAQ7L523 313 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 ZBTB8OSQ8IWT0 167 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 GPD1LQ8N335 351 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 MFSD14AQ96MC6 490 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 TUT1Q9H6E5 874 aaKnown RBP18.66■□□□□ 0.58
HDDC3-206ENST00000561036 SUGCTQ9HAC7 445 aa18.66■□□□□ 0.58
HDDC3-206ENST00000561036 EPN1Q9Y6I3 576 aaPredicted RBP18.66■□□□□ 0.58
HDDC3-206ENST00000561036 TNNT1P13805 278 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 CYP2B6P20813 491 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 GTF2H1P32780 548 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 CYLC1P35663 651 aaPredicted RBP18.65■□□□□ 0.58
HDDC3-206ENST00000561036 POLR2FP61218 127 aaKnown RBP18.65■□□□□ 0.58
HDDC3-206ENST00000561036 MTF1Q14872 753 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 CYP4F22Q6NT55 531 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 EFCAB12Q6NXP0 572 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 CHP1Q99653 195 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 NFKBIZQ9BYH8 718 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 CCDC113Q9H0I3 377 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 GCNT4Q9P109 453 aa18.65■□□□□ 0.58
HDDC3-206ENST00000561036 RRN3P2A6NIE6 340 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 LRRC53A6NM62 1247 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 EXTL3O43909 919 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 NDUFA10O95299 355 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 LDHAP00338 332 aaKnown RBP18.64■□□□□ 0.57
HDDC3-206ENST00000561036 SLC9A1P19634 815 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 RFX1P22670 979 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 MYL7Q01449 175 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 DRP2Q13474 957 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 SFMBT2Q5VUG0 894 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 LINC01465Q8N7H1 131 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 RDH13Q8NBN7 331 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 C16orf45Q96MC5 204 aaPredicted RBP18.64■□□□□ 0.57
HDDC3-206ENST00000561036 MRPL4Q9BYD3 311 aaKnown RBP18.64■□□□□ 0.57
HDDC3-206ENST00000561036 AIPL1Q9NZN9 384 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 USP20Q9Y2K6 914 aa18.64■□□□□ 0.57
HDDC3-206ENST00000561036 ZNF233A6NK53 670 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
HDDC3-206ENST00000561036 ADRB2P07550 413 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 TRIM49P0CI25 452 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 TRIM49CP0CI26 452 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 UCHL3P15374 230 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 TMOD1P28289 359 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 CYP2C19P33261 490 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 KRT83P78385 493 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 CYP24A1Q07973 514 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 CCL14Q16627 93 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 DEFB115Q30KQ5 88 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 CBWD2Q8IUF1 395 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 FMNL3Q8IVF7 1028 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 LRRC71Q8N4P6 559 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 TRAPPC12Q8WVT3 735 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 AP5M1Q9H0R1 490 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 NHEJ1Q9H9Q4 299 aaPredicted RBP18.63■□□□□ 0.57
HDDC3-206ENST00000561036 SIX2Q9NPC8 291 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 MGAMO43451 1857 aa18.63■□□□□ 0.57
HDDC3-206ENST00000561036 A0A0B4J269 797 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 GOLGA8IPA6NC78 632 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 GOLGA8JA6NMD2 632 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
HDDC3-206ENST00000561036 ADCY6O43306 1168 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 SERPING1P05155 500 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 SRGAP2CP0DJJ0 459 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 KLRC1P26715 233 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 PSMC4P43686 418 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 CPT1AP50416 773 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 PTENP60484 403 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
HDDC3-206ENST00000561036 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
HDDC3-206ENST00000561036 MAPK6Q16659 721 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 CBWD6Q4V339 395 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 CBWD3Q5JTY5 395 aa18.62■□□□□ 0.57
HDDC3-206ENST00000561036 CBWD5Q5RIA9 395 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms