RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 XKR3Q5GH77 459 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 GLB1LQ6UWU2 654 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 TMEM173Q86WV6 379 aaPredicted RBP11.99□□□□□ -0.49
TPM1-227ENST00000560970 UBALD2Q8IYN6 164 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 KREMEN2Q8NCW0 462 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 NIFKQ9BYG3 293 aaKnown RBP11.99□□□□□ -0.49
TPM1-227ENST00000560970 IRF2BPLQ9H1B7 796 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 TMEM60Q9H2L4 133 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 FAM105AQ9NUU6 356 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
TPM1-227ENST00000560970 PATJQ8NI35 1801 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 A0A087WZ62 844 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 IGKV6-21A0A0C4DH24 114 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 CTSAP10619 480 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.494e-8■■■■■ 38.8
TPM1-227ENST00000560970 ANP32AP39687 249 aaKnown RBP11.98□□□□□ -0.49
TPM1-227ENST00000560970 NUBP1P53384 320 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 SPIRE1Q08AE8 756 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
TPM1-227ENST00000560970 RHPN2Q8IUC4 686 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 NOSTRINQ8IVI9 506 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 VPS52Q8N1B4 723 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 LPPQ93052 612 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 SNX21Q969T3 373 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 NLRP4Q96MN2 994 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 JPH2Q9BR39 696 aaPredicted RBP11.98□□□□□ -0.49
TPM1-227ENST00000560970 FDXACB1Q9BRP7 624 aaPredicted RBP11.98□□□□□ -0.49
TPM1-227ENST00000560970 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
TPM1-227ENST00000560970 SFXN1Q9H9B4 322 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 INPP5FQ9Y2H2 1132 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 IRAK3Q9Y616 596 aa11.98□□□□□ -0.49
TPM1-227ENST00000560970 TBX3O15119 743 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 NEMFO60524 1076 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 GFRA3O60609 400 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 CSDE1O75534 798 aaKnown RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 STBD1O95210 358 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 BRD1O95696 1058 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 PDGFBP01127 241 aaPredicted RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 AVPR2P30518 371 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 MCM7P33993 719 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 TOB1P50616 345 aaPredicted RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 RNASELQ05823 741 aaKnown RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 PPP2R5CQ13362 524 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 NOMO2Q5JPE7 1267 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 PLA2G4FQ68DD2 849 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 CATSPER4Q7RTX7 472 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 DDX53Q86TM3 631 aaKnown RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 URGCPQ8TCY9 931 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 IGSF21Q96ID5 467 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 NAP1L4Q99733 375 aaKnown RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 SUCLA2Q9P2R7 463 aaPredicted RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 STK39Q9UEW8 545 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 DBR1Q9UK59 544 aaKnown RBP11.97□□□□□ -0.49
TPM1-227ENST00000560970 KIF3AQ9Y496 699 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 FANCMQ8IYD8 2048 aa11.97□□□□□ -0.49
TPM1-227ENST00000560970 DMDP11532 3685 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 GALR2O43603 387 aaPredicted RBP11.96□□□□□ -0.49
TPM1-227ENST00000560970 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.49
TPM1-227ENST00000560970 EPCAMP16422 314 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 PSMC5P62195 406 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.49
TPM1-227ENST00000560970 PTPN14Q15678 1187 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 ZNF174Q15697 407 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 CALCRLQ16602 461 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 ANO5Q75V66 913 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 AUTS2Q8WXX7 1259 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 PGBD4Q96DM1 585 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 SH2D3AQ9BRG2 576 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 WRAP73Q9P2S5 460 aaPredicted RBP11.96□□□□□ -0.49
TPM1-227ENST00000560970 DNAJB4Q9UDY4 337 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 USTQ9Y2C2 406 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 PPME1Q9Y570 386 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.49
TPM1-227ENST00000560970 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 MEIS3P2A8K0S8 358 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 B4GALT3O60512 393 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 DKC1O60832 514 aaKnown RBP eCLIP11.95□□□□□ -0.5
TPM1-227ENST00000560970 ZNF623O75123 536 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 CXCL14O95715 111 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 GALTP07902 379 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 WEE2P0C1S8 567 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 SLC11A1P49279 550 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms