RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AGPAT5Q9NUQ2 364 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 SEPT9Q9UHD8 586 aaPredicted RBP20.82■□□□□ 0.92
TPM1-226ENST00000560959 DNAH14Q0VDD8 3507 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 NRP1O14786 923 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 CHMP2AO43633 222 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 B4GALT3O60512 393 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 CFHP08603 1231 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 PUM1Q14671 1186 aaKnown RBP eCLIP20.81■□□□□ 0.925e-9■□□□□ 8.1
TPM1-226ENST00000560959 Q4G0T1 1027 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 DGLUCYQ7Z3D6 616 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 MIER3Q7Z3K6 550 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 EXOC8Q8IYI6 725 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 CCDC148Q8NFR7 591 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 RSAD1Q9HA92 442 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 IFT122Q9HBG6 1241 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 RXFP1Q9HBX9 757 aa20.81■□□□□ 0.92
TPM1-226ENST00000560959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.81■□□□□ 0.92
TPM1-226ENST00000560959 CLUHO75153 1309 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 EFEMP2O95967 443 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 SSBP05455 408 aaKnown RBP eCLIP20.8■□□□□ 0.92
TPM1-226ENST00000560959 URODP06132 367 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 RFX1P22670 979 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 GBP2P32456 591 aaPredicted RBP20.8■□□□□ 0.92
TPM1-226ENST00000560959 ADCK5Q3MIX3 580 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 SRGAP1Q7Z6B7 1085 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 GPR65Q8IYL9 337 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 RNF168Q8IYW5 571 aaPredicted RBP20.8■□□□□ 0.92
TPM1-226ENST00000560959 CNNM3Q8NE01 707 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 HERC2P3Q9BVR0 1158 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 DLGAP2Q9P1A6 1054 aa20.8■□□□□ 0.92
TPM1-226ENST00000560959 CYP3A7-CYP3A51PA0A087WV96 503 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 TEX28O15482 410 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 GLUD1P00367 558 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 CYP3A7P24462 503 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 AKAP17AQ02040 695 aaKnown RBP20.79■□□□□ 0.92
TPM1-226ENST00000560959 KIAA0319Q5VV43 1072 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 RASEFQ8IZ41 740 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 RSAD2Q8WXG1 361 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 TBC1D17Q9HA65 648 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 SIT1Q9Y3P8 196 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 PPME1Q9Y570 386 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 NID2Q14112 1375 aa20.79■□□□□ 0.92
TPM1-226ENST00000560959 DDX11L8A8MPP1 907 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 INPPL1O15357 1258 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 NCLP19338 710 aaKnown RBP20.78■□□□□ 0.92
TPM1-226ENST00000560959 HOXA11P31270 313 aaPredicted RBP20.78■□□□□ 0.92
TPM1-226ENST00000560959 AK2P54819 239 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 ANO5Q75V66 913 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 KSR1Q8IVT5 923 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 C1orf210Q8IVY1 113 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 KIAA2013Q8IYS2 634 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 FBXL16Q8N461 479 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 RUBCNQ92622 972 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 NLRP4Q96MN2 994 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 MYADMQ96S97 322 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
TPM1-226ENST00000560959 SH3GLB2Q9NR46 395 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 SLC2A4RGQ9NR83 387 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 DLL3Q9NYJ7 618 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 NAP1L2Q9ULW6 460 aaPredicted RBP20.78■□□□□ 0.92
TPM1-226ENST00000560959 R4GN57 208 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 WDR81Q562E7 1941 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 FRYLO94915 3013 aa20.78■□□□□ 0.92
TPM1-226ENST00000560959 MED19A0JLT2 244 aaPredicted RBP20.77■□□□□ 0.92
TPM1-226ENST00000560959 TMEM150BA6NC51 233 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 ANHXE9PGG2 379 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 SP9P0CG40 484 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 LAMP2P13473 410 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 GLUD2P49448 558 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 AFF1P51825 1210 aaKnown RBP20.77■□□□□ 0.92
TPM1-226ENST00000560959 PSMC5P62195 406 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 FGD1P98174 961 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 DSG1Q02413 1049 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 PCBP1Q15365 356 aaKnown RBP eCLIP20.77■□□□□ 0.92
TPM1-226ENST00000560959 UBXN11Q5T124 520 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 COLGALT2Q8IYK4 626 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 SMG7Q92540 1137 aaKnown RBP20.77■□□□□ 0.92
TPM1-226ENST00000560959 ZNF707Q96C28 371 aaPredicted RBP20.77■□□□□ 0.92
TPM1-226ENST00000560959 CHST7Q9NS84 486 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 MARCH5Q9NX47 278 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 ZDHHC7Q9NXF8 308 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 CA14Q9ULX7 337 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 COL4A3BPQ9Y5P4 624 aa20.77■□□□□ 0.92
TPM1-226ENST00000560959 ZFP37Q9Y6Q3 630 aaPredicted RBP20.77■□□□□ 0.92
TPM1-226ENST00000560959 C2CD2LO14523 706 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 POMCP01189 267 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 NTRK3Q16288 839 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 MOXD1Q6UVY6 613 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 TAS1R1Q7RTX1 841 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 GPR152Q8TDT2 470 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 TBCKQ8TEA7 893 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 SLC7A3Q8WY07 619 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 SH2D3AQ9BRG2 576 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 NT5C3AQ9H0P0 336 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 ARHGEF3Q9NR81 526 aa20.76■□□□□ 0.91
TPM1-226ENST00000560959 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.76■□□□□ 0.91
TPM1-226ENST00000560959 DKC1O60832 514 aaKnown RBP eCLIP20.75■□□□□ 0.91
TPM1-226ENST00000560959 STARD6P59095 220 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms