RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ATP1A2P50993 1020 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 GNGT1P63211 74 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 ZNF211Q13398 564 aaPredicted RBP15.8■□□□□ 0.12
CRTC3-210ENST00000560927 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
CRTC3-210ENST00000560927 MTMR2Q13614 643 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 ALCAMQ13740 583 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 TMEM117Q9H0C3 514 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 TBC1D22BQ9NU19 505 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 ADSSP30520 456 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 USP8P40818 1118 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 CUL1Q13616 776 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 UAP1Q16222 522 aaPredicted RBP15.8■□□□□ 0.12
CRTC3-210ENST00000560927 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 CBWD2Q8IUF1 395 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 CD302Q8IX05 232 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 TMEM174Q8WUU8 243 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 ALG3Q92685 438 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 RMDN3Q96TC7 470 aa15.8■□□□□ 0.12
CRTC3-210ENST00000560927 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 ANKRD63C9JTQ0 380 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 ANKRD65E5RJM6 399 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 CLSTN1O94985 981 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 HSD17B3P37058 310 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 POU5F1Q01860 360 aaKnown RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 XKR9Q5GH70 373 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 C4orf19Q8IY42 314 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 RPUSD2Q8IZ73 545 aaKnown RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 EIF1ADQ8N9N8 165 aaKnown RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 OR2W6PQ8NHA6 318 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 SAAL1Q96ER3 474 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 PDCD2LQ9BRP1 358 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 PXMP2Q9NR77 195 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 EIF3HO15372 352 aaKnown RBP eCLIP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 SGPL1O95470 568 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 MXI1P50539 228 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 NCKAP1LP55160 1127 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 SOX10P56693 466 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 SKOR1P84550 965 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 MAP2K1Q02750 393 aaPredicted RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 CETN1Q12798 172 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 PDCLQ13371 301 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 AADACL2Q6P093 401 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 MAATS1Q7Z4T9 603 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 FMNL3Q8IVF7 1028 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 ELMO3Q96BJ8 720 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 PCDHB18PQ96TA0 734 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 ST6GALNAC4Q9H4F1 302 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 SLITRK6Q9H5Y7 841 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 RPAP3Q9H6T3 665 aaPredicted RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
CRTC3-210ENST00000560927 DAAM1Q9Y4D1 1078 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 RIPK3Q9Y572 518 aa15.79■□□□□ 0.12
CRTC3-210ENST00000560927 P4HA2O15460 535 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 PSMC5P62195 406 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CEP85LQ5SZL2 805 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 RNF207Q6ZRF8 634 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 ANO5Q75V66 913 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.78■□□□□ 0.12
CRTC3-210ENST00000560927 SEMA4DQ92854 862 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 KREMEN1Q96MU8 473 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 POP1Q99575 1024 aaKnown RBP15.78■□□□□ 0.12
CRTC3-210ENST00000560927 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 DPH5Q9H2P9 285 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 ALG6Q9Y672 507 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CCDC169A6NNP5 214 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CHRNB2P17787 502 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 NOP9Q86U38 636 aaKnown RBP15.78■□□□□ 0.12
CRTC3-210ENST00000560927 TMEM161BQ8NDZ6 487 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CCDC127Q96BQ5 260 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 CTTNBP2NLQ9P2B4 639 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 TELO2Q9Y4R8 837 aa15.78■□□□□ 0.12
CRTC3-210ENST00000560927 WDR64B1ANS9 1081 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 H0YGN5 161 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 ATMINO43313 823 aaPredicted RBP15.77■□□□□ 0.12
CRTC3-210ENST00000560927 NPTX2P47972 431 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 MARCKSL1P49006 195 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 SNRNP35Q16560 246 aaKnown RBP15.77■□□□□ 0.12
CRTC3-210ENST00000560927 ARHGEF16Q5VV41 709 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 C10orf67Q8IYJ2 551 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 CCDC26Q8TAB7 109 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 EPS8L1Q8TE68 723 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 KRT35Q92764 455 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 ATG4CQ96DT6 458 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 TRIM31Q9BZY9 425 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 CARD9Q9H257 536 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 FEZ2Q9UHY8 353 aaPredicted RBP15.77■□□□□ 0.12
CRTC3-210ENST00000560927 TBX20Q9UMR3 447 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 NFS1Q9Y697 457 aa15.77■□□□□ 0.12
CRTC3-210ENST00000560927 TMEM110-MUSTN1A8MSY1 372 aa15.77■□□□□ 0.11
CRTC3-210ENST00000560927 CCT5P48643 541 aa15.77■□□□□ 0.11
CRTC3-210ENST00000560927 SLC47A2Q86VL8 602 aa15.77■□□□□ 0.11
CRTC3-210ENST00000560927 RHOT2Q8IXI1 618 aa15.77■□□□□ 0.11
CRTC3-210ENST00000560927 PPM1KQ8N3J5 372 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms