RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 CENPQQ7L2Z9 268 aaPredicted RBP21.32■■□□□ 1
CRNDE-210ENST00000560912 URGCPQ8TCY9 931 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 TMEM175Q9BSA9 504 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 EMILIN2Q9BXX0 1053 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 RSAD1Q9HA92 442 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 DUSP12Q9UNI6 340 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 COL4A3BPQ9Y5P4 624 aa21.32■■□□□ 1
CRNDE-210ENST00000560912 FANCMQ8IYD8 2048 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 EML1O00423 815 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 AOC1P19801 751 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 AFF1P51825 1210 aaKnown RBP21.31■■□□□ 1
CRNDE-210ENST00000560912 TDGQ13569 410 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 UBXN11Q5T124 520 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 BLIDQ8IZY5 108 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 CMASQ8NFW8 434 aaPredicted RBP21.31■■□□□ 1
CRNDE-210ENST00000560912 DHX33Q9H6R0 707 aaKnown RBP21.31■■□□□ 1
CRNDE-210ENST00000560912 MINDY3Q9H8M7 445 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 VAV3Q9UKW4 847 aa21.31■■□□□ 1
CRNDE-210ENST00000560912 SLC37A4O43826 429 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 KLRC2P26717 231 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 HOXA11P31270 313 aaPredicted RBP21.3■■□□□ 1
CRNDE-210ENST00000560912 NPEPPSP55786 919 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 PPP2R5CQ13362 524 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 FRMD5Q7Z6J6 570 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 CCDC105Q8IYK2 499 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 TRIM22Q8IYM9 498 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 FAM177A1Q8N128 213 aaPredicted RBP21.3■■□□□ 1
CRNDE-210ENST00000560912 FLCNQ8NFG4 579 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 KCNK12Q9HB15 430 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 MARCH5Q9NX47 278 aa21.3■■□□□ 1
CRNDE-210ENST00000560912 DDX25Q9UHL0 483 aaKnown RBP21.3■■□□□ 1
CRNDE-210ENST00000560912 CACNA1AO00555 2505 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 ZNF292O60281 2723 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 EFEMP2O95967 443 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 SSBP05455 408 aaKnown RBP eCLIP21.29■■□□□ 1
CRNDE-210ENST00000560912 QARSP47897 775 aaKnown RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 FOXK2Q01167 660 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 TOB2Q14106 344 aaPredicted RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 LETM2Q2VYF4 491 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 SRGAP1Q7Z6B7 1085 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 RNF168Q8IYW5 571 aaPredicted RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 ZNF579Q8NAF0 562 aaKnown RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 SLC7A3Q8WY07 619 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 NKD2Q969F2 451 aaPredicted RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 HERC2P3Q9BVR0 1158 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 RHOBTB2Q9BYZ6 727 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 KCNMB3Q9NPA1 279 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 MRPL17Q9NRX2 175 aaKnown RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 KANSL3Q9P2N6 904 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 WRAP73Q9P2S5 460 aaPredicted RBP21.29■■□□□ 1
CRNDE-210ENST00000560912 PPME1Q9Y570 386 aa21.29■■□□□ 1
CRNDE-210ENST00000560912 DOCK6Q96HP0 2047 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 SPDYE4A6NLX3 237 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 NRP1O14786 923 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 INPPL1O15357 1258 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 PI15O43692 258 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 N4BP1O75113 896 aaKnown RBP21.28■■□□□ 1
CRNDE-210ENST00000560912 DEXIO95424 95 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 SOD2P04179 222 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 NCLP19338 710 aaKnown RBP21.28■■□□□ 1
CRNDE-210ENST00000560912 PSMA5P28066 241 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 SSRP1Q08945 709 aaKnown RBP21.28■■□□□ 1
CRNDE-210ENST00000560912 NONOQ15233 471 aaKnown RBP eCLIP21.28■■□□□ 1
CRNDE-210ENST00000560912 PSPC1Q8WXF1 523 aaKnown RBP21.28■■□□□ 1
CRNDE-210ENST00000560912 MAN1C1Q9NR34 630 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 IGSF9Q9P2J2 1179 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 FAN1Q9Y2M0 1017 aa21.28■■□□□ 1
CRNDE-210ENST00000560912 PAPLNO95428 1278 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 ALDH2P05091 517 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 URODP06132 367 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 RFC5P40937 340 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 INF2Q27J81 1249 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 GALNT17Q6IS24 598 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 PRPF31Q8WWY3 499 aaKnown RBP21.27■■□□□ 1
CRNDE-210ENST00000560912 TMEM143Q96AN5 459 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 AIFM3Q96NN9 605 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 FAM193BQ96PV7 902 aaPredicted RBP21.27■■□□□ 1
CRNDE-210ENST00000560912 RPS6KC1Q96S38 1066 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 MYH15Q9Y2K3 1946 aa21.27■■□□□ 1
CRNDE-210ENST00000560912 EP300Q09472 2414 aaPredicted RBP21.27■■□□□ 1
CRNDE-210ENST00000560912 DKC1O60832 514 aaKnown RBP eCLIP21.26■□□□□ 0.99
CRNDE-210ENST00000560912 POMCP01189 267 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 P4HBP07237 508 aaKnown RBP21.26■□□□□ 0.99
CRNDE-210ENST00000560912 LAMTOR4Q0VGL1 99 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 KRT25Q7Z3Z0 450 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 EXOC8Q8IYI6 725 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 COLGALT2Q8IYK4 626 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 SIX5Q8N196 739 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 SMG8Q8ND04 991 aaKnown RBP21.26■□□□□ 0.99
CRNDE-210ENST00000560912 CEP170P1Q96L14 293 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 FAM20AQ96MK3 541 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 RTP3Q9BQQ7 232 aa21.26■□□□□ 0.99
CRNDE-210ENST00000560912 WDR6Q9NNW5 1121 aaKnown RBP21.26■□□□□ 0.99
CRNDE-210ENST00000560912 TEX28O15482 410 aa21.25■□□□□ 0.99
CRNDE-210ENST00000560912 NARSO43776 548 aaKnown RBP21.25■□□□□ 0.99
CRNDE-210ENST00000560912 GAS2O43903 313 aaKnown RBP21.25■□□□□ 0.99
CRNDE-210ENST00000560912 ADH1AP07327 375 aa21.25■□□□□ 0.99
CRNDE-210ENST00000560912 SRGAP2CP0DJJ0 459 aa21.25■□□□□ 0.99
CRNDE-210ENST00000560912 DSC1Q08554 894 aa21.25■□□□□ 0.99
CRNDE-210ENST00000560912 CYP26C1Q6V0L0 522 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms