RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZSCAN16Q9H4T2 348 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 CWH43Q9H720 699 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 RNF19AQ9NV58 838 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 PRMT7Q9NVM4 692 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 COG5Q9UP83 839 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 MEIS3P2A8K0S8 358 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 DLL1O00548 723 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 ZNF623O75123 536 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 HIP1RO75146 1068 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 MARCKSP29966 332 aaPredicted RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 CA8P35219 290 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 LONP1P36776 959 aaKnown RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 KRT17Q04695 432 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 PRPF4BQ13523 1007 aaKnown RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 MAPK6Q16659 721 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 NOMO2Q5JPE7 1267 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC27A1Q6PCB7 646 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCNT2Q6UVM3 1135 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 CDR2LQ86X02 465 aaPredicted RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 SPPL3Q8TCT6 385 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 BSNDQ8WZ55 320 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 PPP2R3CQ969Q6 453 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 CCDC51Q96ER9 411 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 DRC1Q96MC2 740 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 ASB2Q96Q27 587 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 KIFC3Q9BVG8 833 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 EIF2AQ9BY44 585 aaKnown RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 IGFLR1Q9H665 355 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 RSAD1Q9HA92 442 aa14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 PUF60Q9UHX1 559 aaKnown RBP14.33□□□□□ -0.12
CTDSPL2-209ENST00000560620 A0A0C4DFX4 3053 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 NPTXRO95502 500 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PRKCBP05771 671 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PLA2G4BP0C869 781 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 NCLP19338 710 aaKnown RBP14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 DNAJB1P25685 340 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PPM1AP35813 382 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PEX3P56589 373 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 DMP1Q13316 513 aaPredicted RBP14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 AMHR2Q16671 573 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 UBXN11Q5T124 520 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 CDCA2Q69YH5 1023 aaPredicted RBP14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 RINT1Q6NUQ1 792 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 RSPH1Q8WYR4 309 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PNMA5Q96PV4 448 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 RUSC1Q9BVN2 902 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 UBN1Q9NPG3 1134 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 TLR9Q9NR96 1032 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 SPG21Q9NZD8 308 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 HES2Q9Y543 173 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 IPPQ9Y573 584 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
CTDSPL2-209ENST00000560620 PLXNA4Q9HCM2 1894 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 SFI1A8K8P3 1242 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 NT5C1B-RDH14C9J2C7 533 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 K7ERI5 159 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 OFD1O75665 1012 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 POMCP01189 267 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCNA5P22460 613 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 TXLNAP40222 546 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 EFNA5P52803 228 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 BCAR1P56945 870 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 GRIN1Q05586 938 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 FOXD4L6Q3SYB3 417 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 HYIQ5T013 277 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 FOXD4L3Q6VB84 417 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 AGMOQ6ZNB7 445 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 MRPL10Q7Z7H8 261 aaKnown RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 RBM23Q86U06 439 aaKnown RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCTD17Q8N5Z5 321 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 SMG8Q8ND04 991 aaKnown RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 ADPGKQ9BRR6 497 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 NXF3Q9H4D5 531 aaKnown RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 UBE2ZQ9H832 354 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 KMT5AQ9NQR1 393 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 ENTPD7Q9NQZ7 604 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 TBC1D13Q9NVG8 400 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 CLDND1Q9NY35 253 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 KANSL3Q9P2N6 904 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
CTDSPL2-209ENST00000560620 A0A1B0GUA9 196 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 N4BP3O15049 544 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 PLCG1P19174 1290 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 AKAP5P24588 427 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 IRS1P35568 1242 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 MLH1P40692 756 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms