RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NPTXRO95502 500 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 BMP15O95972 392 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 IRS1P35568 1242 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 NAMPTP43490 491 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 RAB27AP51159 221 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 PEX3P56589 373 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 ZBTB8OSQ8IWT0 167 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 THNSL1Q8IYQ7 743 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 POF1BQ8WVV4 589 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 PLVAPQ9BX97 442 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 NFKBIZQ9BYH8 718 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 FBXO2Q9UK22 296 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 IPPQ9Y573 584 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 PCDHB12Q9Y5F1 795 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 MYO7AQ13402 2215 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 NT5C1B-RDH14C9J2C7 533 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 ZNF623O75123 536 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 FGF18O76093 207 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 PLA2G4BP0C869 781 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 SKIP12755 728 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 PLCG1P19174 1290 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 UBA7P41226 1012 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 MAPK7Q13164 816 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 NOTUMQ6P988 496 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 GLB1LQ6UWU2 654 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 P2RX5Q93086 422 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 PGBD4Q96DM1 585 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 AK8Q96MA6 479 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-211ENST00000559850 UNC80Q8N2C7 3258 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 B4GALT3O60512 393 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 PRKCBP05771 671 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 ITGA4P13612 1032 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 LAG3P18627 525 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 AXLP30530 894 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 LONP1P36776 959 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 SLC12A3P55017 1021 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 TMEM132AQ24JP5 1023 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 NOMO2Q5JPE7 1267 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 KCNT2Q6UVM3 1135 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 ADGRD2Q7Z7M1 963 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 ZNF558Q96NG5 402 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 NT5C3AQ9H0P0 336 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 FZD8Q9H461 694 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 RSAD1Q9HA92 442 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 AAASQ9NRG9 546 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 BLOC1S4Q9NUP1 217 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 TBC1D13Q9NVG8 400 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
RABGGTA-211ENST00000559850 ZC3H11AO75152 810 aaKnown RBP eCLIP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 POMCP01189 267 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 AKAP5P24588 427 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 NPTX2P47972 431 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 KCNQ1P51787 676 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 BCAR1P56945 870 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 PRPF4BQ13523 1007 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 MCM6Q14566 821 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 PPP2R5AQ15172 486 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 EP400NLQ6ZTU2 488 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 TMEM173Q86WV6 379 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 TRIM6Q9C030 488 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 PDZD7Q9H5P4 517 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 IGFLR1Q9H665 355 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 NRDE2Q9H7Z3 1164 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
RABGGTA-211ENST00000559850 A0A1B0GUA9 196 aa16.37■□□□□ 0.21
RABGGTA-211ENST00000559850 SLC16A4O15374 487 aa16.37■□□□□ 0.21
RABGGTA-211ENST00000559850 DDHD2O94830 711 aa16.37■□□□□ 0.21
RABGGTA-211ENST00000559850 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-211ENST00000559850 MLH1P40692 756 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms