RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FGFR4P22455 802 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM1-221ENST00000559831 LIG4P49917 911 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 CDK7P50613 346 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 TPM4P67936 248 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 LRRC63Q05C16 580 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 POU5F1BQ06416 359 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 GSE1Q14687 1217 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 TRIM60Q495X7 471 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 HSP90AA4PQ58FG1 418 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 SPATA1Q5VX52 437 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 TTI2Q6NXR4 508 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 SRGAP1Q7Z6B7 1085 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 FAM126BQ8IXS8 530 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 CSGALNACT2Q8N6G5 542 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 NOC3LQ8WTT2 800 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 DHX38Q92620 1227 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 DUSP9Q99956 384 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 MRPL4Q9BYD3 311 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 NFKBIZQ9BYH8 718 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 CELF4Q9BZC1 486 aaKnown RBP11.44□□□□□ -0.58
TPM1-221ENST00000559831 ATP11BQ9Y2G3 1177 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
TPM1-221ENST00000559831 TANC1Q9C0D5 1861 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ANKRD63C9JTQ0 380 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ERLIN2O94905 339 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 NR3C1P04150 777 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 DARSP14868 501 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 EN2P19622 333 aaPredicted RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 CYP2J2P51589 502 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 CRYBB1P53674 252 aaPredicted RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 PRPF4BQ13523 1007 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 NCAPHQ15003 741 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 SNX17Q15036 470 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 TRIM71Q2Q1W2 868 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 ZCWPW2Q504Y3 356 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 CATSPER4Q7RTX7 472 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 NECAB2Q7Z6G3 386 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 CREBRFQ8IUR6 639 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 GOLGA5Q8TBA6 731 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 TARS2Q9BW92 718 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 SRRTQ9BXP5 876 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 FZD8Q9H461 694 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 PCIF1Q9H4Z3 704 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 SAMSN1Q9NSI8 373 aaKnown RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 PRMT7Q9NVM4 692 aaPredicted RBP11.43□□□□□ -0.58
TPM1-221ENST00000559831 FANCLQ9NW38 375 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ANKFY1Q9P2R3 1169 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
TPM1-221ENST00000559831 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 DCDC2CA8MYV0 355 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 RBAK-RBAKDNI3L0D1 243 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 ACKR2O00590 384 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CETN3O15182 167 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 B4GALT5O43286 388 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 FGFR1OPO95684 399 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 CD4P01730 458 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CHRNA1P02708 482 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 IQCF3P0C7M6 154 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 CKBP12277 381 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CAPN2P17655 700 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM1-221ENST00000559831 EIF4BP23588 611 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 NR2F2P24468 414 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 TLE2Q04725 743 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 MGAT3Q09327 533 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 ADAM9Q13443 819 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 ZNF618Q5T7W0 954 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 ATF7IP2Q5U623 682 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 SLC39A4Q6P5W5 647 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 ZBTB33Q86T24 672 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 RPAINQ86UA6 219 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 TNS4Q8IZW8 715 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 TMEM40Q8WWA1 233 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 POMGNT1Q8WZA1 660 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 KCNN1Q92952 543 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 ZBTB45Q96K62 511 aaPredicted RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 ACO2Q99798 780 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 CBWD1Q9BRT8 395 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CGNQ9P2M7 1197 aaKnown RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
TPM1-221ENST00000559831 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
TPM1-221ENST00000559831 CNTNAP2Q9UHC6 1331 aa11.41□□□□□ -0.58
TPM1-221ENST00000559831 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
TPM1-221ENST00000559831 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
TPM1-221ENST00000559831 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
TPM1-221ENST00000559831 TSPAN1O60635 241 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms