RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 FBXO18Q8NFZ0 1043 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 SUSD6Q92537 303 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 IGSF21Q96ID5 467 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 FOXP1Q9H334 677 aaPredicted RBP21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 DNAJB4Q9UDY4 337 aa21.24■□□□□ 0.99
KNSTRN-208ENST00000559604 TSPAN1O60635 241 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 ERLIN2O94905 339 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 SRGAP2BP0DMP2 458 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 XRCC6P12956 609 aaKnown RBP eCLIP21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 TECP42680 631 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 RNASELQ05823 741 aaKnown RBP21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 POU5F1BQ06416 359 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 TFDP1Q14186 410 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 ZNF174Q15697 407 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 ANKRD54Q6NXT1 300 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 SYCE2Q6PIF2 218 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 CATSPER3Q86XQ3 398 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 RNF135Q8IUD6 432 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 SMG8Q8ND04 991 aaKnown RBP21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 CCDC43Q96MW1 224 aaKnown RBP21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 S1PR5Q9H228 398 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 RSAD1Q9HA92 442 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 CNTNAP2Q9UHC6 1331 aa21.23■□□□□ 0.99
KNSTRN-208ENST00000559604 PRR33A8MZF0 331 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 LOC730098B7Z3J9 87 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 INO80B-WBP1J3KQ70 363 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 MED24O75448 989 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 NCLP19338 710 aaKnown RBP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 GLRA2P23416 452 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 SLC11A1P49279 550 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 HMGN5P82970 282 aaKnown RBP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 MBTD1Q05BQ5 628 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 PCBP1Q15365 356 aaKnown RBP eCLIP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 AMHR2Q16671 573 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 DDX53Q86TM3 631 aaKnown RBP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 VPS52Q8N1B4 723 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 URGCPQ8TCY9 931 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 EIF2AQ9BY44 585 aaKnown RBP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 GBP3Q9H0R5 595 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 ZBP1Q9H171 429 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 TUFT1Q9NNX1 390 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 SH2B1Q9NRF2 756 aaPredicted RBP21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 MUTYHQ9UIF7 546 aa21.22■□□□□ 0.99
KNSTRN-208ENST00000559604 CARNS1A5YM72 827 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 USO1O60763 962 aaKnown RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 CLASP2O75122 1294 aaKnown RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 DDHD2O94830 711 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 CXCL14O95715 111 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 AXLP30530 894 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 ORC2Q13416 577 aaPredicted RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 HERC4Q5GLZ8 1057 aaPredicted RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 AUTS2Q8WXX7 1259 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 CPB2Q96IY4 423 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 POLR3CQ9BUI4 534 aaPredicted RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 PHF7Q9BWX1 381 aaPredicted RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 VN1R3Q9BXE9 311 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 NFKBIZQ9BYH8 718 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 POLR3FQ9H1D9 316 aaPredicted RBP21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 IPPQ9Y573 584 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 HCFC2Q9Y5Z7 792 aa21.21■□□□□ 0.99
KNSTRN-208ENST00000559604 OR52Z1P0C646 297 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 CBX2Q14781 532 aaPredicted RBP21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 NOTUMQ6P988 496 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 NOSTRINQ8IVI9 506 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 CNNM3Q8NE01 707 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 CCDC51Q96ER9 411 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 APOL5Q9BWW9 433 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 RNF39Q9H2S5 420 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 GPRC5CQ9NQ84 441 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 IRAK3Q9Y616 596 aa21.2■□□□□ 0.98
KNSTRN-208ENST00000559604 POMCP01189 267 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 CTSAP10619 480 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 ITGA4P13612 1032 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 ARF4P18085 180 aaPredicted RBP21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 CA8P35219 290 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 RBM25P49756 843 aaKnown RBP21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 BMS1Q14692 1282 aaKnown RBP21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 TTC38Q5R3I4 469 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 POTEGQ6S5H5 508 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 FAM184AQ8NB25 1140 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 CASP10Q92851 521 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 NACC1Q96RE7 527 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 CSRNP2Q9H175 543 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 KANSL3Q9P2N6 904 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 DBR1Q9UK59 544 aaKnown RBP21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 HCN4Q9Y3Q4 1203 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 HES2Q9Y543 173 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 TDRD15B5MCY1 1934 aaKnown RBP21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 TECTAO75443 2155 aa21.19■□□□□ 0.98
KNSTRN-208ENST00000559604 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 INPPL1O15357 1258 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 B4GALT5O43286 388 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 HOXB8P17481 243 aaPredicted RBP21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 RPA1P27694 616 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 MAEAQ7L5Y9 396 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 C4orf32Q8N8J7 132 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 RPGRIP1Q96KN7 1286 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 TMEM175Q9BSA9 504 aa21.18■□□□□ 0.98
KNSTRN-208ENST00000559604 UBN1Q9NPG3 1134 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms