RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 ZNF862O60290 1169 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 KCNA2P16389 499 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ADSSP30520 456 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 NPTX2P47972 431 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 KIF22Q14807 665 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 GLE1Q53GS7 698 aaKnown RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 HSP90B2PQ58FF3 399 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ZNF746Q6NUN9 644 aaPredicted RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 NLRX1Q86UT6 975 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 TMEM161BQ8NDZ6 487 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 NSUN6Q8TEA1 469 aaKnown RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 BSNDQ8WZ55 320 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 TAF4BQ92750 862 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 GPRASP2Q96D09 838 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 KRT12Q99456 494 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 UBE2TQ9NPD8 197 aaPredicted RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 TAS2R14Q9NYV8 317 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 TMEM59LQ9UK28 342 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 STXBP5LQ9Y2K9 1186 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 PCDHA10Q9Y5I2 948 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 SCN4AP35499 1836 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
SPG11-217ENST00000559511 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 AGPSO00116 658 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 CES2O00748 559 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 STBD1O95210 358 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 RFX1P22670 979 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 TNFRSF8P28908 595 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPG11-217ENST00000559511 CBWD2Q8IUF1 395 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 METTL13Q8N6R0 699 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 RIN2Q8WYP3 895 aaPredicted RBP11.98□□□□□ -0.49
SPG11-217ENST00000559511 EXOC4Q96A65 974 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 GABBR1Q9UBS5 961 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 NCANO14594 1321 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 PFASO15067 1338 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 LRRC37A2A6NM11 1700 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 MAPK13O15264 365 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 SORBS3O60504 671 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 PEX10O60683 326 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 GGCXP38435 758 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
SPG11-217ENST00000559511 PEX26Q7Z412 305 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 DAAM2Q86T65 1068 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 NT5DC3Q86UY8 548 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 SLC35G2Q8TBE7 412 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 SLC20A1Q8WUM9 679 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 ELP3Q9H9T3 547 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
SPG11-217ENST00000559511 ESYT3A0FGR9 886 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 DENND3A2RUS2 1198 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 IRF6O14896 467 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 P4HA2O15460 535 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 MAFGO15525 162 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 RNF40O75150 1001 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 HEXIM1O94992 359 aaKnown RBP11.97□□□□□ -0.49
SPG11-217ENST00000559511 TMEM253P0C7T8 217 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 CCDC172P0C7W6 258 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 ABCB4P21439 1286 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 MXI1P50539 228 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 EPHB4P54760 987 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
SPG11-217ENST00000559511 SP4Q02446 784 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 DMP1Q13316 513 aaPredicted RBP11.97□□□□□ -0.49
SPG11-217ENST00000559511 SNRNP35Q16560 246 aaKnown RBP11.97□□□□□ -0.49
SPG11-217ENST00000559511 LBX2Q6XYB7 198 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 MOB2Q70IA6 237 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 MAP4K3Q8IVH8 894 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 ACTRT1Q8TDG2 376 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 RFFLQ8WZ73 363 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 KAT5Q92993 513 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 ARHGEF26Q96DR7 871 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 PBKQ96KB5 322 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 CEP170P1Q96L14 293 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 IWS1Q96ST2 819 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 MAF1Q9H063 256 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.97□□□□□ -0.493e-10■■■■■ 57.7
SPG11-217ENST00000559511 SEPT11Q9NVA2 429 aaKnown RBP11.97□□□□□ -0.49
SPG11-217ENST00000559511 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
SPG11-217ENST00000559511 CEP104O60308 925 aa11.96□□□□□ -0.49
SPG11-217ENST00000559511 BUB1BO60566 1050 aaPredicted RBP11.96□□□□□ -0.49
SPG11-217ENST00000559511 CNGA1P29973 690 aa11.96□□□□□ -0.49
SPG11-217ENST00000559511 CARSP49589 748 aaKnown RBP11.96□□□□□ -0.49
SPG11-217ENST00000559511 GUCY2DQ02846 1103 aa11.96□□□□□ -0.49
SPG11-217ENST00000559511 CETN1Q12798 172 aa11.96□□□□□ -0.49
SPG11-217ENST00000559511 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
SPG11-217ENST00000559511 SLC39A4Q6P5W5 647 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms