RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 SNAP47Q5SQN1 464 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 TMEM179Q6ZVK1 233 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 ERMP1Q7Z2K6 904 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 CCDC91Q7Z6B0 441 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 APOBEC3FQ8IUX4 373 aaKnown RBP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 PHKBQ93100 1093 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 CCDC120Q96HB5 630 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 MAP3K14Q99558 947 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 SLC26A6Q9BXS9 759 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 MTMR4Q9NYA4 1195 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 SCAF8Q9UPN6 1271 aaKnown RBP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 MTMR6Q9Y217 621 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 STK36Q9NRP7 1315 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 PLEKHA8P1O95397 391 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 GH2P01242 217 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 TPM3P06753 285 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 FDPSP14324 419 aaKnown RBP7.93□□□□□ -1.14
ZEB1-216ENST00000559496 GDNFP39905 211 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 AKAP17AQ02040 695 aaKnown RBP7.93□□□□□ -1.14
ZEB1-216ENST00000559496 RAD51AP2Q09MP3 1159 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 GRM4Q14833 912 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 KCNMB1Q16558 191 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 TMTC3Q6ZXV5 915 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 TMPRSS7Q7RTY8 843 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 LRRC47Q8N1G4 583 aaKnown RBP7.93□□□□□ -1.14
ZEB1-216ENST00000559496 WASF1Q92558 559 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 C8orf76Q96K31 380 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 Q96M66 194 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 ALG1Q9BT22 464 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 DEFB129Q9H1M3 183 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 KANSL2Q9H9L4 492 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 CABP5Q9NP86 173 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 ADARB2Q9NS39 739 aaKnown RBP7.93□□□□□ -1.14
ZEB1-216ENST00000559496 GGA3Q9NZ52 723 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 REV1Q9UBZ9 1251 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 CLIP2Q9UDT6 1046 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 PGAP2Q9UHJ9 254 aa7.93□□□□□ -1.14
ZEB1-216ENST00000559496 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-216ENST00000559496 RBAK-RBAKDNI3L0D1 243 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 BAG4O95429 457 aaKnown RBP7.92□□□□□ -1.14
ZEB1-216ENST00000559496 GARTP22102 1010 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 GNAQP50148 359 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 GSCP56915 257 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-216ENST00000559496 ICA1Q05084 483 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 FZD5Q13467 585 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 SEPT2Q15019 361 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 SHROOM1Q2M3G4 852 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-216ENST00000559496 MIGA2Q7L4E1 593 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 HOOK2Q96ED9 719 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 TEPSINQ96N21 525 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 RNF26Q9BY78 433 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-216ENST00000559496 DUSP15Q9H1R2 295 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-216ENST00000559496 KBTBD4Q9NVX7 518 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 NYAP2Q9P242 653 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 KCNH3Q9ULD8 1083 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 ATP6V1DQ9Y5K8 247 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 MYH4Q9Y623 1939 aa7.92□□□□□ -1.14
ZEB1-216ENST00000559496 MYH6P13533 1939 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 GLTPD2A6NH11 291 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 PPP1R12AO14974 1030 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 FARP2O94887 1054 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 HTR3BO95264 441 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 DEXIO95424 95 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 PARP1P09874 1014 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 PDHBP11177 359 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 EEF2P13639 858 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 GUCY1A2P33402 732 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 HNRNPH2P55795 449 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 GUCY1B3Q02153 619 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 TRIM29Q14134 588 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 DCAF15Q66K64 600 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 REC114Q7Z4M0 266 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 TXLNBQ8N3L3 684 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 SRBD1Q8N5C6 995 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 AIFM3Q96NN9 605 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 ALPK1Q96QP1 1244 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 LZTS2Q9BRK4 669 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 TRIT1Q9H3H1 467 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 C19orf73Q9NVV2 129 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 CWC15Q9P013 229 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 MAD2L2Q9UI95 211 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 ZBTB21Q9ULJ3 1066 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 PPP2R3BQ9Y5P8 575 aa7.91□□□□□ -1.14
ZEB1-216ENST00000559496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 DDX49Q9Y6V7 483 aaKnown RBP7.91□□□□□ -1.14
ZEB1-216ENST00000559496 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 KLRF2D3W0D1 207 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 UBE2Q2LH0YL09 131 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 PRPF3O43395 683 aaKnown RBP7.9□□□□□ -1.14
ZEB1-216ENST00000559496 ESR1P03372 595 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 GOLGA8HP0CJ92 632 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 EPHX2P34913 555 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 RESTQ13127 1097 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 CCDC96Q2M329 555 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 ASPRV1Q53RT3 343 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms