RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PBX3P40426 434 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 ALDH7A1P49419 539 aaKnown RBP13.95□□□□□ -0.18
LRRC28-214ENST00000559433 UBXN11Q5T124 520 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-214ENST00000559433 NOTUMQ6P988 496 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 RSPH1Q8WYR4 309 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 CPB2Q96IY4 423 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 VWA3AA6NCI4 1184 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 H3BQ06 376 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 B4GALT5O43286 388 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 PDCP20941 246 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 CDC25AP30304 524 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 HYAL1Q12794 435 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 ZRSR1Q15695 479 aaKnown RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 AMHR2Q16671 573 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 PDE12Q6L8Q7 609 aaKnown RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 RBM23Q86U06 439 aaKnown RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 ZBTB8OSQ8IWT0 167 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 NECAB3Q96P71 396 aaPredicted RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
LRRC28-214ENST00000559433 TLE6Q9H808 572 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 SPG21Q9NZD8 308 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
LRRC28-214ENST00000559433 CNTNAP2Q9UHC6 1331 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 E9PMD0 336 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 K7ELQ4 463 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 ZC3H11AO75152 810 aaKnown RBP eCLIP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 OFD1O75665 1012 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 EYA4O95677 639 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 ARF4P18085 180 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 NDUFV1P49821 464 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 COL19A1Q14993 1142 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 ARL6IP4Q66PJ3 421 aaKnown RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 AGMOQ6ZNB7 445 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 MRPL10Q7Z7H8 261 aaKnown RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 ADGRD2Q7Z7M1 963 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 MMTAG2Q9BU76 263 aaKnown RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 TRIM6Q9C030 488 aaPredicted RBP13.93□□□□□ -0.18
LRRC28-214ENST00000559433 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 CSRNP2Q9H175 543 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 C2orf40Q9H1Z8 148 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 TBC1D13Q9NVG8 400 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 IPPQ9Y573 584 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 MYH15Q9Y2K3 1946 aa13.93□□□□□ -0.18
LRRC28-214ENST00000559433 NCOR1O75376 2440 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 FSD2A1L4K1 749 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 BMP15O95972 392 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 ITGA4P13612 1032 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 LIG1P18858 919 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 CA8P35219 290 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 NAMPTP43490 491 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 NRIP1P48552 1158 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 BCAR1P56945 870 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 PPP2R5AQ15172 486 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 TMEM132AQ24JP5 1023 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 PLPP4Q5VZY2 271 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 SMG8Q8ND04 991 aaKnown RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 DEPTORQ8TB45 409 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 KIFAP3Q92845 792 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 IFT74Q96LB3 600 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 PRIMPOLQ96LW4 560 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 FAM193BQ96PV7 902 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 APOL6Q9BWW8 343 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 UBN1Q9NPG3 1134 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 ENTPD7Q9NQZ7 604 aa13.92□□□□□ -0.18
LRRC28-214ENST00000559433 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-214ENST00000559433 BDP1A6H8Y1 2624 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 GRXCR2A6NFK2 248 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NT5C1B-RDH14C9J2C7 533 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 FSCN2O14926 492 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 LINC01565O15544 149 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NPTXRO95502 500 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms