RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CLLU1OSQ5K130 101 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 SFR1Q86XK3 245 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 ECHDC2Q86YB7 292 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 SMG8Q8ND04 991 aaKnown RBP12.63□□□□□ -0.39
SNX1-204ENST00000559061 GLIS3Q8NEA6 775 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 SPIRE2Q8WWL2 714 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 INO80BQ9C086 356 aaPredicted RBP12.63□□□□□ -0.39
SNX1-204ENST00000559061 CXCL16Q9H2A7 254 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
SNX1-204ENST00000559061 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 PDZD7Q9H5P4 517 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 PIN4Q9Y237 131 aaKnown RBP12.63□□□□□ -0.39
SNX1-204ENST00000559061 PCDHA11Q9Y5I1 949 aa12.63□□□□□ -0.39
SNX1-204ENST00000559061 PHLPP2Q6ZVD8 1323 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 A0A0U1RQF3 1178 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
SNX1-204ENST00000559061 KLRC4O43908 158 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 UPP2O95045 317 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 PRKCBP05771 671 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 CA3P07451 260 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 FGFR1P11362 822 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 NMT1P30419 496 aaKnown RBP12.62□□□□□ -0.39
SNX1-204ENST00000559061 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
SNX1-204ENST00000559061 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
SNX1-204ENST00000559061 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 Q7L0L9 218 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
SNX1-204ENST00000559061 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 LPPQ93052 612 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 PTPRHQ9HD43 1115 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 CHST12Q9NRB3 414 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 C1orf112Q9NSG2 853 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 REV3LO60673 3130 aa12.62□□□□□ -0.39
SNX1-204ENST00000559061 TRIP11Q15643 1979 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PDCD11Q14690 1871 aaKnown RBP12.61□□□□□ -0.39
SNX1-204ENST00000559061 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 DENND3A2RUS2 1198 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 CCDC169A6NNP5 214 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 ACKR2O00590 384 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 B4GALT3O60512 393 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 SLFN14P0C7P3 912 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 LIG1P18858 919 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PROZP22891 400 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 TAP1Q03518 808 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
SNX1-204ENST00000559061 CUL4BQ13620 913 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PPP2R5AQ15172 486 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 MRPL10Q7Z7H8 261 aaKnown RBP12.61□□□□□ -0.39
SNX1-204ENST00000559061 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
SNX1-204ENST00000559061 TIFAQ96CG3 184 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 IFT74Q96LB3 600 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 C7orf25Q9BPX7 421 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 C2orf40Q9H1Z8 148 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 BLZF1Q9H2G9 400 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 CUEDC2Q9H467 287 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 KMT5AQ9NQR1 393 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PRMT7Q9NVM4 692 aaPredicted RBP12.61□□□□□ -0.39
SNX1-204ENST00000559061 FAM13BQ9NYF5 915 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 HES2Q9Y543 173 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 ANK1P16157 1881 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 PLXNA4Q9HCM2 1894 aa12.61□□□□□ -0.39
SNX1-204ENST00000559061 TISP43B9A030 160 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 TLL1O43897 1013 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 ZNF623O75123 536 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 FAM13AO94988 1023 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 HOXD13P35453 343 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 KCNA1Q09470 495 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 COASYQ13057 564 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNX1-204ENST00000559061 ZC2HC1CQ53FD0 456 aaPredicted RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 TWF2Q6IBS0 349 aaKnown RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 ZBTB8OSQ8IWT0 167 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms