RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 YOD1Q5VVQ6 348 aaPredicted RBP6.24□□□□□ -1.41
CASC4-207ENST00000559037 DPP8Q6V1X1 898 aaPredicted RBP6.24□□□□□ -1.41
CASC4-207ENST00000559037 PNMA8AQ86V59 439 aaPredicted RBP6.24□□□□□ -1.41
CASC4-207ENST00000559037 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 ZSWIM2Q8NEG5 633 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 PANK1Q8TE04 598 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 THAP3Q8WTV1 239 aaPredicted RBP6.24□□□□□ -1.41
CASC4-207ENST00000559037 DDX11Q96FC9 970 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 YIPF4Q9BSR8 244 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 DHRS4Q9BTZ2 278 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 RXFP1Q9HBX9 757 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 POLLQ9UGP5 575 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 PGAP2Q9UHJ9 254 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 AKAP11Q9UKA4 1901 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 CASP8AP2Q9UKL3 1982 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 FAM221BA6H8Z2 402 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 YDJCA8MPS7 323 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 FAM47E-STBD1D6RA91 191 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 EFCAB14O75071 495 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 EPS15P42566 896 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 LIMS1P48059 325 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 GPSM2P81274 684 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 GCKRQ14397 625 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 CCDC152Q4G0S7 254 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 SAPCD2Q86UD0 394 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 CNTROBQ8N137 903 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 TBC1D16Q8TBP0 767 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 FNIP1Q8TF40 1166 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 DNAAF4Q8WXU2 420 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
CASC4-207ENST00000559037 PLA2G12BQ9BX93 195 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 SLC6A20Q9NP91 592 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 LUC7LQ9NQ29 371 aaKnown RBP6.23□□□□□ -1.41
CASC4-207ENST00000559037 GPRC5DQ9NZD1 345 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 SIT1Q9Y3P8 196 aa6.23□□□□□ -1.41
CASC4-207ENST00000559037 RTL9Q8NET4 1388 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 SH3D21A4FU49 640 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 WNT9AO14904 365 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 CSF1RP07333 972 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 NKX3-2P78367 333 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 NEXNQ0ZGT2 675 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 TNIP1Q15025 636 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 USP50Q70EL3 339 aaPredicted RBP6.22□□□□□ -1.41
CASC4-207ENST00000559037 TRMT2AQ8IZ69 625 aaKnown RBP6.22□□□□□ -1.41
CASC4-207ENST00000559037 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 LINS1Q8NG48 757 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 DPF2Q92785 391 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 DNAJC7Q99615 494 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 MYOTQ9UBF9 498 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 MRPS23Q9Y3D9 190 aaKnown RBP6.22□□□□□ -1.41
CASC4-207ENST00000559037 ECM29Q5VYK3 1845 aa6.22□□□□□ -1.41
CASC4-207ENST00000559037 TCRBV5S2A0A599 114 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 MSCO60682 206 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 RAD17O75943 681 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 SASH1O94885 1247 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 SOD2P04179 222 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 C8BP07358 591 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 FAM153BP0C7A2 387 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 MC3RP41968 323 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 GMPSP49915 693 aaPredicted RBP6.21□□□□□ -1.42
CASC4-207ENST00000559037 CTSWP56202 376 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 PAK1Q13153 545 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 C2orf27AQ580R0 203 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 BEND3Q5T5X7 828 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 OTOP3Q7RTS5 596 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 UBE3BQ7Z3V4 1068 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 MTDHQ86UE4 582 aaKnown RBP6.21□□□□□ -1.42
CASC4-207ENST00000559037 ANKRD18AQ8IVF6 992 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 KISS1RQ969F8 398 aaPredicted RBP6.21□□□□□ -1.42
CASC4-207ENST00000559037 TOE1Q96GM8 510 aaKnown RBP6.21□□□□□ -1.42
CASC4-207ENST00000559037 WRNIP1Q96S55 665 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 MYH16Q9H6N6 1097 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 GREM2Q9H772 168 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 DTLQ9NZJ0 730 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 CNOT7Q9UIV1 285 aaKnown RBP6.21□□□□□ -1.42
CASC4-207ENST00000559037 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 MYH13Q9UKX3 1938 aa6.21□□□□□ -1.42
CASC4-207ENST00000559037 SHTN1A0MZ66 631 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 PSMD14O00487 310 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 GSTA4O15217 222 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 CYP7B1O75881 506 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
CASC4-207ENST00000559037 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
CASC4-207ENST00000559037 C6orf222P0C671 652 aaPredicted RBP6.2□□□□□ -1.42
CASC4-207ENST00000559037 GNAT1P11488 350 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 SLFN5Q08AF3 891 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 TRIM61Q5EBN2 209 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 HABP4Q5JVS0 413 aaKnown RBP6.2□□□□□ -1.42
CASC4-207ENST00000559037 FAM209AQ5JX71 171 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 CST9Q5W186 159 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 UHMK1Q8TAS1 419 aaKnown RBP6.2□□□□□ -1.42
CASC4-207ENST00000559037 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
CASC4-207ENST00000559037 EXOC2Q96KP1 924 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms