RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 AXLP30530 894 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 TOB1P50616 345 aaPredicted RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 BCAR1P56945 870 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 CLUL1Q15846 466 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 NOMO2Q5JPE7 1267 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 PLPP4Q5VZY2 271 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 RBM23Q86U06 439 aaKnown RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 TMEM173Q86WV6 379 aaPredicted RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 GJD3Q8N144 294 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 CCDC43Q96MW1 224 aaKnown RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 POLR3FQ9H1D9 316 aaPredicted RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 NRDE2Q9H7Z3 1164 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 TLE6Q9H808 572 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 BARX2Q9UMQ3 279 aaPredicted RBP18.91■□□□□ 0.62
LRRC28-210ENST00000558879 A0A087WWV3 80 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 INPPL1O15357 1258 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 B4GALT3O60512 393 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 ZC3H11AO75152 810 aaKnown RBP eCLIP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 NCLP19338 710 aaKnown RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 GNL2Q13823 731 aaKnown RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 LONRF3Q496Y0 759 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 CDCA2Q69YH5 1023 aaPredicted RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 ADHFE1Q8IWW8 467 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 SMG8Q8ND04 991 aaKnown RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 ERMNQ8TAM6 284 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 RSAD1Q9HA92 442 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 NGRNQ9NPE2 291 aaKnown RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 ENTPD7Q9NQZ7 604 aa18.9■□□□□ 0.62
LRRC28-210ENST00000558879 PUF60Q9UHX1 559 aaKnown RBP18.9■□□□□ 0.62
LRRC28-210ENST00000558879 HIDE1A8MVS5 230 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 PER2O15055 1255 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.61
LRRC28-210ENST00000558879 KRT17Q04695 432 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 NOTUMQ6P988 496 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 IGSF22Q8N9C0 903 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 CNNM3Q8NE01 707 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 MCPH1Q8NEM0 835 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 MICAL1Q8TDZ2 1067 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 BCL7CQ8WUZ0 217 aaPredicted RBP18.89■□□□□ 0.61
LRRC28-210ENST00000558879 NACC1Q96RE7 527 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 EIF2AQ9BY44 585 aaKnown RBP18.89■□□□□ 0.61
LRRC28-210ENST00000558879 EPHX3Q9H6B9 360 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 GPRC5CQ9NQ84 441 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 DNAJB4Q9UDY4 337 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 INPP5FQ9Y2H2 1132 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 KIF3AQ9Y496 699 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 IPPQ9Y573 584 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 PCDHB6Q9Y5E3 794 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 VWA8A3KMH1 1905 aa18.89■□□□□ 0.61
LRRC28-210ENST00000558879 NT5C1B-RDH14C9J2C7 533 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 PI4K2BG5E9Z4 385 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 INO80B-WBP1J3KQ70 363 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 GALTP07902 379 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 ARF4P18085 180 aaPredicted RBP18.88■□□□□ 0.61
LRRC28-210ENST00000558879 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
LRRC28-210ENST00000558879 AFF1P51825 1210 aaKnown RBP18.88■□□□□ 0.61
LRRC28-210ENST00000558879 ECM1Q16610 540 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 TMEM169Q96HH4 297 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 IGSF21Q96ID5 467 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 C1QTNF1Q9BXJ1 281 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 ZBP1Q9H171 429 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
LRRC28-210ENST00000558879 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.88■□□□□ 0.61
LRRC28-210ENST00000558879 ZMYM2Q9UBW7 1377 aa18.88■□□□□ 0.61
LRRC28-210ENST00000558879 C2orf71A6NGG8 1288 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 SLC11A1P49279 550 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 PTGDRQ13258 359 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 SMC1AQ14683 1233 aaKnown RBP18.87■□□□□ 0.61
LRRC28-210ENST00000558879 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 CSRNP2Q9H175 543 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 C11orf16Q9NQ32 467 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 IRAK3Q9Y616 596 aa18.87■□□□□ 0.61
LRRC28-210ENST00000558879 LAD1O00515 517 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 B4GALT5O43286 388 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 DDHD2O94830 711 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 CYP11B2P19099 503 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 GJB2P29033 226 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 SSTR3P32745 418 aaPredicted RBP18.86■□□□□ 0.61
LRRC28-210ENST00000558879 PRPHP41219 470 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 MCM2P49736 904 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 RNASELQ05823 741 aaKnown RBP18.86■□□□□ 0.61
LRRC28-210ENST00000558879 PDIA5Q14554 519 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 FAM187BQ17R55 369 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 PADI6Q6TGC4 694 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 TMC7Q7Z402 723 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 DDX53Q86TM3 631 aaKnown RBP18.86■□□□□ 0.61
LRRC28-210ENST00000558879 BSNDQ8WZ55 320 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 POP1Q99575 1024 aaKnown RBP18.86■□□□□ 0.61
LRRC28-210ENST00000558879 TMEM175Q9BSA9 504 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 VN1R3Q9BXE9 311 aa18.86■□□□□ 0.61
LRRC28-210ENST00000558879 LRRIQ4A6NIV6 560 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms