RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GAS2O43903 313 aaKnown RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 POMCP01189 267 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 RPA1P27694 616 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 KIFC3Q9BVG8 833 aa13.89□□□□□ -0.19
SMAD3-208ENST00000558827 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
SMAD3-208ENST00000558827 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 E9PMD0 336 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 ZNF623O75123 536 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 DDHD2O94830 711 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 NPTXRO95502 500 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 SKIP12755 728 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 ITGA4P13612 1032 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 ARF4P18085 180 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 SLC11A1P49279 550 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 KRT17Q04695 432 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 AMHR2Q16671 573 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 PPP2R3CQ969Q6 453 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 PGBD4Q96DM1 585 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 GAD1Q99259 594 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 BHMT2Q9H2M3 363 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 RSAD1Q9HA92 442 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 MIOSQ9NXC5 875 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 KLK14Q9P0G3 267 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
SMAD3-208ENST00000558827 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 IPPQ9Y573 584 aa13.88□□□□□ -0.19
SMAD3-208ENST00000558827 FSCN2O14926 492 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 GLP2RO95838 553 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 SSBP05455 408 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 GALTP07902 379 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 CYP11B2P19099 503 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 AKAP5P24588 427 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 MCM2P49736 904 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 RAB27AP51159 221 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 PLCB3Q01970 1234 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 UBE3AQ05086 875 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 COL19A1Q14993 1142 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 DTHD1Q6ZMT9 781 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 MRPL10Q7Z7H8 261 aaKnown RBP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 EFHBQ8N7U6 833 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 URGCPQ8TCY9 931 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 RABGGTAQ92696 567 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 FAM193BQ96PV7 902 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 MRPL9Q9BYD2 267 aaKnown RBP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 NXF3Q9H4D5 531 aaKnown RBP13.87□□□□□ -0.19
SMAD3-208ENST00000558827 CLEC1BQ9P126 229 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 CD207Q9UJ71 328 aa13.87□□□□□ -0.19
SMAD3-208ENST00000558827 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 VWA3AA6NCI4 1184 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 MBTPS2O43462 519 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 NCK2O43639 380 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 CXCL14O95715 111 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 DUSP6Q16828 381 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 HAUS3Q68CZ6 603 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 NOTUMQ6P988 496 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 GJD3Q8N144 294 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 DEPTORQ8TB45 409 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 TMEM169Q96HH4 297 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 CACNG4Q9UBN1 327 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 PARP2Q9UGN5 583 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 RAPGEFL1Q9UHV5 662 aa13.86□□□□□ -0.19
SMAD3-208ENST00000558827 PRG3Q9Y2Y8 225 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-208ENST00000558827 FAM86C2PA6NEL3 165 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 F8W810 466 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 EDN1P05305 212 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms