RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PHKBQ93100 1093 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 OSBPL6Q9BZF3 934 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 IL25Q9H293 177 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 TAF6LQ9Y6J9 622 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 HECTD1Q9ULT8 2610 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 COL4A2P08572 1712 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 TGM5O43548 720 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 LRP3O75074 770 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 PAPLNO95428 1278 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 SOD2P04179 222 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 RPL17P18621 184 aaKnown RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 FSHRP23945 695 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 KIF5BP33176 963 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 NT5C2P49902 561 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 DRP2Q13474 957 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 CKAP2LQ8IYA6 745 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 ZNF687Q8N1G0 1237 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 CNNM2Q9H8M5 875 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 HEBP1Q9NRV9 189 aa13.48□□□□□ -0.25
SMAD3-206ENST00000558739 PRG3Q9Y2Y8 225 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-206ENST00000558739 APC2O95996 2303 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-206ENST00000558739 MAFGO15525 162 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 HRO43593 1189 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 SDSP20132 328 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
SMAD3-206ENST00000558739 TWF2Q6IBS0 349 aaKnown RBP13.47□□□□□ -0.25
SMAD3-206ENST00000558739 EFCAB12Q6NXP0 572 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 KDF1Q8NAX2 398 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-206ENST00000558739 ITFG1Q8TB96 612 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 FGF13Q92913 245 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 MAP7D2Q96T17 732 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 SPZ1Q9BXG8 430 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 CDH7Q9ULB5 785 aa13.47□□□□□ -0.25
SMAD3-206ENST00000558739 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
SMAD3-206ENST00000558739 ACACAQ13085 2346 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 NRP1O14786 923 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 EFEMP2O95967 443 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 MAGEA9P43362 315 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 SATB1Q01826 763 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 CEP55Q53EZ4 464 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 POTEHQ6S545 545 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 AGMOQ6ZNB7 445 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 CELF5Q8N6W0 485 aaKnown RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 PIN4Q9Y237 131 aaKnown RBP13.46□□□□□ -0.25
SMAD3-206ENST00000558739 TICRRQ7Z2Z1 1910 aa13.46□□□□□ -0.25
SMAD3-206ENST00000558739 CHURC1-FNTBB4DL54 471 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 KCNK5O95279 499 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 POMCP01189 267 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 FNTBP49356 437 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 GLUD2P49448 558 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 AASDHQ4L235 1098 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 SRBD1Q8N5C6 995 aaKnown RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 DDX1Q92499 740 aaKnown RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 PLA2G2FQ9BZM2 168 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 SMOC1Q9H4F8 434 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 WASF3Q9UPY6 502 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 MAFBQ9Y5Q3 323 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-206ENST00000558739 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
SMAD3-206ENST00000558739 MEIS1O00470 390 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 GIPC1O14908 333 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 GAS2O43903 313 aaKnown RBP13.44□□□□□ -0.26
SMAD3-206ENST00000558739 RXRAP19793 462 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
SMAD3-206ENST00000558739 ANTXR2P58335 489 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 ADCY1Q08828 1119 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 GAS6Q14393 721 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
SMAD3-206ENST00000558739 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
SMAD3-206ENST00000558739 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms