RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TTC12Q9H892 705 aaPredicted RBP17.32■□□□□ 0.36
TPM1-211ENST00000558314 RSAD1Q9HA92 442 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 C5orf42Q9H799 3197 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 WNT7AO00755 349 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 SLITRK3O94933 977 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 GALTP07902 379 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 SPIRE1Q08AE8 756 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 CES5AQ6NT32 575 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 AGMOQ6ZNB7 445 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 PIGOQ8TEQ8 1089 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 SUSD6Q92537 303 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 TNFRSF25Q93038 417 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 PBXIP1Q96AQ6 731 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 MFSD14AQ96MC6 490 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 TRAIPQ9BWF2 469 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 ZBP1Q9H171 429 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
TPM1-211ENST00000558314 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 M0R296 226 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 ASAP2O43150 1006 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 GAS2O43903 313 aaKnown RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 B4GALT3O60512 393 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 ZNF623O75123 536 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 SEC24BO95487 1268 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 ITGA4P13612 1032 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 EPCAMP16422 314 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 MCM7P33993 719 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 ZXDAP98168 799 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 NCBP1Q09161 790 aaKnown RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 KCNC3Q14003 757 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 TFDP1Q14186 410 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 UBXN11Q5T124 520 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 TMEM184AQ6ZMB5 413 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 TRIM67Q6ZTA4 783 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 ASAP3Q8TDY4 903 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 EIF2AQ9BY44 585 aaKnown RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 FAN1Q9Y2M0 1017 aa17.3■□□□□ 0.36
TPM1-211ENST00000558314 PRG3Q9Y2Y8 225 aaPredicted RBP17.3■□□□□ 0.36
TPM1-211ENST00000558314 POTEMA6NI47 508 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 C2CD2LO14523 706 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 DDHD2O94830 711 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 MYBP10242 640 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 HOXB8P17481 243 aaPredicted RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 HOXA11P31270 313 aaPredicted RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 OR1G1P47890 313 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
TPM1-211ENST00000558314 DDX53Q86TM3 631 aaKnown RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 XPNPEP1Q9NQW7 623 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 ARIH1Q9Y4X5 557 aaPredicted RBP17.29■□□□□ 0.36
TPM1-211ENST00000558314 HES2Q9Y543 173 aa17.29■□□□□ 0.36
TPM1-211ENST00000558314 TSPAN1O60635 241 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 ALDH2P05091 517 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 CTSAP10619 480 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 KLRC2P26717 231 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 GNL2Q13823 731 aaKnown RBP17.28■□□□□ 0.36
TPM1-211ENST00000558314 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
TPM1-211ENST00000558314 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
TPM1-211ENST00000558314 SUGP1Q8IWZ8 645 aaKnown RBP17.28■□□□□ 0.36
TPM1-211ENST00000558314 FBXL18Q96ME1 805 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 POLR3FQ9H1D9 316 aaPredicted RBP17.28■□□□□ 0.36
TPM1-211ENST00000558314 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 POMKQ9H5K3 350 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 IPPQ9Y573 584 aa17.28■□□□□ 0.36
TPM1-211ENST00000558314 CNTNAP2Q9UHC6 1331 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 DGAT1O75907 488 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 LIG1P18858 919 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
TPM1-211ENST00000558314 MLH1P40692 756 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 PTENP60484 403 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 CAPSQ13938 189 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 ZNF174Q15697 407 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 TMEM132AQ24JP5 1023 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 TMC5Q6UXY8 1006 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 MRPL10Q7Z7H8 261 aaKnown RBP17.27■□□□□ 0.36
TPM1-211ENST00000558314 CABP7Q86V35 215 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 SMG8Q8ND04 991 aaKnown RBP17.27■□□□□ 0.36
TPM1-211ENST00000558314 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 C8orf76Q96K31 380 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 RIPOR3Q96MK2 946 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 GAD1Q99259 594 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 HSD17B14Q9BPX1 270 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 VN1R3Q9BXE9 311 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 TMEM60Q9H2L4 133 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 ADAM7Q9H2U9 754 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 ANKEF1Q9NU02 776 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 KANSL3Q9P2N6 904 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
TPM1-211ENST00000558314 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
TPM1-211ENST00000558314 MUC6Q6W4X9 2439 aa17.27■□□□□ 0.35
TPM1-211ENST00000558314 CARNS1A5YM72 827 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 LRRIQ4A6NIV6 560 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 NRP1O14786 923 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms