RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 DISC1Q9NRI5 854 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 HOMER3Q9NSC5 361 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ZNHIT6Q9NWK9 470 aaKnown RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 HDAC6Q9UBN7 1215 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 STK24Q9Y6E0 443 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 SQORQ9Y6N5 450 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 FAM169AQ9Y6X4 670 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ITIH6Q6UXX5 1313 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 KDM3AQ9Y4C1 1321 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 C17orf102A2RUQ5 167 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 GOLGA6CA6NDK9 693 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 WNT7AO00755 349 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 SPTLC2O15270 562 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 CXCL10P02778 98 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 GOLGA6DP0CG33 693 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 CYP2C9P11712 490 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 TOB1P50616 345 aaPredicted RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
RTF1-205ENST00000558298 GYS2P54840 703 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 SMAD3P84022 425 aaKnown RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 SPAG1Q07617 926 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 NNTQ13423 1086 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 PPIGQ13427 754 aaKnown RBP eCLIP8.76□□□□□ -1.014e-6■□□□□ 8.2
RTF1-205ENST00000558298 STIM1Q13586 685 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 EPHA7Q15375 998 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 TARBP2Q15633 366 aaKnown RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 CALCRLQ16602 461 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 PTGISQ16647 500 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 C11orf91Q3C1V1 193 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 PREPLQ4J6C6 727 aaPredicted RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 CCDC38Q502W7 563 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 ZNF484Q5JVG2 852 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 TTC38Q5R3I4 469 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 MARCH8Q5T0T0 291 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 ARL6IP4Q66PJ3 421 aaKnown RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 ZNF662Q6ZS27 426 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 EGFL6Q8IUX8 553 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 C4orf19Q8IY42 314 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 ARFGAP2Q8N6H7 521 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 LINC01465Q8N7H1 131 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 C4orf32Q8N8J7 132 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 CCHCR1Q8TD31 782 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 GLG1Q92896 1179 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 WNT8BQ93098 351 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 DHX58Q96C10 678 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 IQCDQ96DY2 449 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 TRIM6Q9C030 488 aaPredicted RBP8.76□□□□□ -1.01
RTF1-205ENST00000558298 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 RNPEPQ9H4A4 650 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 ANKZF1Q9H8Y5 726 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 IL23AQ9NPF7 189 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 GOLGA6AQ9NYA3 693 aa8.76□□□□□ -1.01
RTF1-205ENST00000558298 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 SMIM35A0A1B0GVV1 85 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 POTEB3A0JP26 581 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 EIF3HO15372 352 aaKnown RBP eCLIP8.75□□□□□ -1.01
RTF1-205ENST00000558298 MAGEB2O15479 319 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 GAS2O43903 313 aaKnown RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 ZNF862O60290 1169 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 STBD1O95210 358 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 OATP04181 439 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 P4HBP07237 508 aaKnown RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 OR52Z1P0C646 297 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 ATP4AP20648 1035 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 PSMC5P62195 406 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 SKOR1P84550 965 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 ATP2C1P98194 919 aaPredicted RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 PDIA5Q14554 519 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 NCAPHQ15003 741 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 GRIK4Q16099 956 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 WLSQ5T9L3 541 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 EMC10Q5UCC4 262 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 PDXDC2PQ6P474 469 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 PSRC1Q6PGN9 363 aaPredicted RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 POTEBQ6S5H4 581 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 NME8Q8N427 588 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 TMEM199Q8N511 208 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 LINC00301Q8NCQ3 95 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 ENOX1Q8TC92 643 aaKnown RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 HSD17B14Q9BPX1 270 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 PYM1Q9BRP8 204 aaKnown RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 SPATS2LQ9NUQ6 558 aaKnown RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 CXXC1Q9P0U4 656 aaPredicted RBP8.75□□□□□ -1.01
RTF1-205ENST00000558298 PCDHA12Q9UN75 941 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 PCDHA2Q9Y5H9 948 aa8.75□□□□□ -1.01
RTF1-205ENST00000558298 TMEM265A0A087WTH1 108 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 IGKV6-21A0A0C4DH24 114 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 GOLGA6L10A0A0M3HER8 536 aa8.74□□□□□ -1.01
RTF1-205ENST00000558298 ANO9A1A5B4 782 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms