RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 STK39Q9UEW8 545 aa11.96□□□□□ -0.49
SHF-203ENST00000558294 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
SHF-203ENST00000558294 VAV3Q9UKW4 847 aa11.96□□□□□ -0.49
SHF-203ENST00000558294 CNTNAP2Q9UHC6 1331 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 PRR23AA6NEV1 266 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 SSBP05455 408 aaKnown RBP eCLIP11.95□□□□□ -0.5
SHF-203ENST00000558294 KLRC2P26717 231 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
SHF-203ENST00000558294 INF2Q27J81 1249 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 UBXN11Q5T124 520 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 GALNT17Q6IS24 598 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 CCDC149Q6ZUS6 474 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 OTOP3Q7RTS5 596 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 PRPF31Q8WWY3 499 aaKnown RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 TMEM175Q9BSA9 504 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 EMILIN2Q9BXX0 1053 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 MFSD1Q9H3U5 465 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
SHF-203ENST00000558294 PPME1Q9Y570 386 aa11.95□□□□□ -0.5
SHF-203ENST00000558294 NRP1O14786 923 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 POMCP01189 267 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 SOD2P04179 222 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 ALDH2P05091 517 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 NPR3P17342 541 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 LAMTOR4Q0VGL1 99 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 TDGQ13569 410 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 LETM2Q2VYF4 491 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 C15orf39Q6ZRI6 1047 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 KRT25Q7Z3Z0 450 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 SRGAP1Q7Z6B7 1085 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 SMG8Q8ND04 991 aaKnown RBP11.94□□□□□ -0.5
SHF-203ENST00000558294 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
SHF-203ENST00000558294 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
SHF-203ENST00000558294 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 FAM20AQ96MK3 541 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
SHF-203ENST00000558294 MARCH5Q9NX47 278 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 DUSP12Q9UNI6 340 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 ARID2Q68CP9 1835 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
SHF-203ENST00000558294 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
SHF-203ENST00000558294 VPS13AQ96RL7 3174 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 CPLX1O14810 134 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 INPPL1O15357 1258 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 PI15O43692 258 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.5
SHF-203ENST00000558294 EFEMP2O95967 443 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 AOC1P19801 751 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 RFC5P40937 340 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 PPP4R3AQ6IN85 833 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 TAS1R1Q7RTX1 841 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 COLGALT2Q8IYK4 626 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 RNF168Q8IYW5 571 aaPredicted RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 FLCNQ8NFG4 579 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 CMASQ8NFW8 434 aaPredicted RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 HAS1Q92839 578 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 FAM193BQ96PV7 902 aaPredicted RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 HERC2P3Q9BVR0 1158 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 KCNK12Q9HB15 430 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 MAN1C1Q9NR34 630 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
SHF-203ENST00000558294 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
SHF-203ENST00000558294 C2CD2LO14523 706 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 GAS2O43903 313 aaKnown RBP11.92□□□□□ -0.5
SHF-203ENST00000558294 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
SHF-203ENST00000558294 URODP06132 367 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
SHF-203ENST00000558294 YWHABP31946 246 aaKnown RBP11.92□□□□□ -0.5
SHF-203ENST00000558294 STK3Q13188 491 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 EMC2Q15006 297 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 EPHA7Q15375 998 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 CCDC105Q8IYK2 499 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 CNNM3Q8NE01 707 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 TCP11Q8WWU5 503 aa11.92□□□□□ -0.5
SHF-203ENST00000558294 LXNQ9BS40 222 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms