RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PABPC5Q96DU9 382 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 UHRF1Q96T88 793 aaPredicted RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 POLR3FQ9H1D9 316 aaPredicted RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 SMC3Q9UQE7 1217 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 PCDHB2Q9Y5E7 798 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 H3BQV1 296 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 NCK2O43639 380 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 TSPAN1O60635 241 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 OFD1O75665 1012 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CSPG5O95196 566 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 SKIP12755 728 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CYP11B2P19099 503 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CCT6AP40227 531 aaKnown RBP9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 PBX3P40426 434 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 RAB27AP51159 221 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 ERVFC1P60507 584 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 PLCB3Q01970 1234 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 UBE3AQ05086 875 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 MBTD1Q05BQ5 628 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CUL4AQ13619 759 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 TFDP1Q14186 410 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 PCBP1Q15365 356 aaKnown RBP eCLIP9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 AMHR2Q16671 573 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 KCNT2Q6UVM3 1135 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 ADGRD2Q7Z7M1 963 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 THNSL1Q8IYQ7 743 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 ABI1Q8IZP0 508 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 LRRC43Q8N309 656 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CCDC43Q96MW1 224 aaKnown RBP9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 NFKBIZQ9BYH8 718 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 GPRC5CQ9NQ84 441 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 CLDND1Q9NY35 253 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 LRWD1Q9UFC0 647 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 PCDHGC5Q9Y5F6 944 aa9.75□□□□□ -0.85
SNRPA1-206ENST00000558059 TRIOO75962 3097 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 MYH11P35749 1972 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 PP2D1A8MPX8 630 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 H3BQ06 376 aaPredicted RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 INO80B-WBP1J3KQ70 363 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 TNFRSF10AO00220 468 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 LAD1O00515 517 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 FSCN2O14926 492 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 LINC01565O15544 149 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 CDC25AP30304 524 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 AXLP30530 894 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 PRPHP41219 470 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 AFF1P51825 1210 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 BCAR1P56945 870 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 DLX2Q07687 328 aaPredicted RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 ADAM15Q13444 863 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 RILPL1Q5EBL4 403 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 NOMO2Q5JPE7 1267 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 HAUS3Q68CZ6 603 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 SLC39A11Q8N1S5 342 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 SMG8Q8ND04 991 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 MCPH1Q8NEM0 835 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 RSPH1Q8WYR4 309 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 MRPS27Q92552 414 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 CPB2Q96IY4 423 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 ZNF558Q96NG5 402 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 MMTAG2Q9BU76 263 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 MRPL9Q9BYD2 267 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 IGFLR1Q9H665 355 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 NRDE2Q9H7Z3 1164 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 TLR9Q9NR96 1032 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 TBC1D13Q9NVG8 400 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 SPG21Q9NZD8 308 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 LZTS1Q9Y250 596 aa9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-206ENST00000558059 ARHGEF35A5YM69 484 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 B4GALT3O60512 393 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 ERLIN2O94905 339 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 ARF4P18085 180 aaPredicted RBP9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 NCLP19338 710 aaKnown RBP9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 PPM1AP35813 382 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 PTCRAQ6ISU1 281 aaPredicted RBP9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 NOTUMQ6P988 496 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 GLB1LQ6UWU2 654 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 EP400NLQ6ZTU2 488 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 EFHBQ8N7U6 833 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 SNX29Q8TEQ0 813 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 CCDC51Q96ER9 411 aa9.73□□□□□ -0.85
SNRPA1-206ENST00000558059 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms