RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 EEPD1Q7L9B9 569 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 FAM114A1Q8IWE2 563 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 ANKRD20A12PQ8NF67 263 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 CEP63Q96MT8 703 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 GPRC5CQ9NQ84 441 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 PDLIM7Q9NR12 457 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 MORF4L1Q9UBU8 362 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 SEL1LQ9UBV2 794 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 DDX41Q9UJV9 622 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 ODF2LQ9ULJ1 636 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 TRAF3IP3Q9Y228 551 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 RBBP6Q7Z6E9 1792 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 LCTP09848 1927 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 ZMYM2Q9UBW7 1377 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 IGSF9BQ9UPX0 1349 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 IGKV6D-21A0A0A0MT36 114 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 USP27XA6NNY8 438 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 AKR1B15C9JRZ8 316 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 PDXKO00764 312 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 EIF3DO15371 548 aaKnown RBP eCLIP8.11□□□□□ -1.11
SPG11-204ENST00000557866 MFAP3LO75121 409 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 OFD1O75665 1012 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 FARP2O94887 1054 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 KIF20AO95235 890 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 ZBTB48P10074 688 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 DNM2P50570 870 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 MARSP56192 900 aaKnown RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 SOX10P56693 466 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 HUNKP57058 714 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 KCTD2Q14681 263 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 MAN2A1Q16706 1144 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 LY6KQ17RY6 165 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 XKR9Q5GH70 373 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 ODR4Q5SWX8 454 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 WDR78Q5VTH9 848 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 ZNF385CQ66K41 422 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 E4F1Q66K89 784 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 MIS18BP1Q6P0N0 1132 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 CCDC62Q6P9F0 684 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 TRMT1LQ7Z2T5 733 aaKnown RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 FBXO16Q8IX29 292 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 CEP89Q96ST8 783 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 KCND1Q9NSA2 647 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 TYW1Q9NV66 732 aaKnown RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 SIK3Q9Y2K2 1263 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
SPG11-204ENST00000557866 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
SPG11-204ENST00000557866 UBE4BO95155 1302 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 IGF2BP3O00425 579 aaKnown RBP eCLIP8.1□□□□□ -1.11
SPG11-204ENST00000557866 CETN3O15182 167 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CLIC2O15247 247 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CALUO43852 315 aaPredicted RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 AKAP3O75969 853 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 GGPS1O95749 300 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 F11P03951 625 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 NR3C1P04150 777 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 TGFB3P10600 412 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 MAPTP10636 758 aaKnown RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 PLS3P13797 630 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 ADORA2AP29274 412 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CASP14P31944 242 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 KCNJ6P48051 423 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 PRKCEQ02156 737 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 ADAM9Q13443 819 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 SYCP1Q15431 976 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 NFIL3Q16649 462 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CELF3Q5SZQ8 465 aaKnown RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 PPFIBP1Q86W92 1011 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 TRIM59Q8IWR1 403 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CCAR2Q8N163 923 aaKnown RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CCDC112Q8NEF3 446 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 SMCR8Q8TEV9 937 aaPredicted RBP8.1□□□□□ -1.11
SPG11-204ENST00000557866 BSNDQ8WZ55 320 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 COPS5Q92905 334 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 ATP6V0A1Q93050 837 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 BORCS6Q96GS4 357 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 CEP170P1Q96L14 293 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 PANX2Q96RD6 677 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 ERGIC2Q96RQ1 377 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 NDST4Q9H3R1 872 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 XPNPEP1Q9NQW7 623 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 PDGFCQ9NRA1 345 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 DMAC2Q9NW81 257 aa8.1□□□□□ -1.11
SPG11-204ENST00000557866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms