RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 SRGAP1Q7Z6B7 1085 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 RTN4RL1Q86UN2 441 aaPredicted RBP12.72□□□□□ -0.37
LINC00648-204ENST00000557749 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 LRRC43Q8N309 656 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
LINC00648-204ENST00000557749 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
LINC00648-204ENST00000557749 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
LINC00648-204ENST00000557749 TUFT1Q9NNX1 390 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
LINC00648-204ENST00000557749 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
LINC00648-204ENST00000557749 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 A0A0U1RQF3 1178 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 STBD1O95210 358 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 OR52Z1P0C646 297 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 MCM7P33993 719 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 PHKA2P46019 1235 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 DSC3Q14574 896 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.37
LINC00648-204ENST00000557749 EMC2Q15006 297 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.37
LINC00648-204ENST00000557749 TTC38Q5R3I4 469 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 CCDC51Q96ER9 411 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 DYDC2Q96IM9 177 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 NLRP4Q96MN2 994 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 MTMR9Q96QG7 549 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 CEP89Q96ST8 783 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 KIF2CQ99661 725 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 STK39Q9UEW8 545 aa12.71□□□□□ -0.37
LINC00648-204ENST00000557749 PUF60Q9UHX1 559 aaKnown RBP12.71□□□□□ -0.37
LINC00648-204ENST00000557749 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
LINC00648-204ENST00000557749 A0A087WZ62 844 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 TBKBP1A7MCY6 615 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 ERLIN2O94905 339 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 SLITRK3O94933 977 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 AXLP30530 894 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 CYP4A11Q02928 519 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 ST3GAL1Q11201 340 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 PLA2G4FQ68DD2 849 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 CNNM3Q8NE01 707 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 NACC1Q96RE7 527 aa12.7□□□□□ -0.38
LINC00648-204ENST00000557749 FDXACB1Q9BRP7 624 aaPredicted RBP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 POLR3CQ9BUI4 534 aaPredicted RBP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 MRPL42Q9Y6G3 142 aaKnown RBP12.7□□□□□ -0.38
LINC00648-204ENST00000557749 H3BQV1 296 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 MGEA5O60502 916 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 SRGAP2BP0DMP2 458 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 KRT17Q04695 432 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 PAN2Q504Q3 1202 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 GLB1LQ6UWU2 654 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 KCTD17Q8N5Z5 321 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 PRPF31Q8WWY3 499 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 PABPC5Q96DU9 382 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 NFKBIZQ9BYH8 718 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 RGL1Q9NZL6 768 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 DBR1Q9UK59 544 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
LINC00648-204ENST00000557749 LZTS1Q9Y250 596 aa12.69□□□□□ -0.38
LINC00648-204ENST00000557749 TRANK1O15050 2925 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 UNC80Q8N2C7 3258 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 TNFRSF10AO00220 468 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 ZNF623O75123 536 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
LINC00648-204ENST00000557749 RPA1P27694 616 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 NPEPPSP55786 919 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 LAMTOR4Q0VGL1 99 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 PDIA5Q14554 519 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 LEXMQ3ZCV2 418 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
LINC00648-204ENST00000557749 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 SPRED2Q7Z698 418 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 THNSL1Q8IYQ7 743 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 TMX3Q96JJ7 454 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 ZNF558Q96NG5 402 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
LINC00648-204ENST00000557749 CDCA3Q99618 268 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms