RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FARP2O94887 1054 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CENPBP07199 599 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DBHP09172 617 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 MYF5P13349 255 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 GSPT1P15170 499 aaKnown RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 ABCB4P21439 1286 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CHKAP35790 457 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PPM1AP35813 382 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 IL6STP40189 918 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 IL12RB1P42701 662 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 WASP42768 502 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SARSP49591 514 aaKnown RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 RENBPP51606 427 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CASP5P51878 434 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 ERVFC1P60507 584 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 RAB1AP62820 205 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DSC2Q02487 901 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 BIRC3Q13489 604 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SLC9A5Q14940 896 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SNX17Q15036 470 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 TIGD5Q53EQ6 642 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 ALFQ53S48 1182 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 BTNL9Q6UXG8 535 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SYDE1Q6ZW31 735 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 GPR155Q7Z3F1 870 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DPP9Q86TI2 863 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SPPL2CQ8IUH8 684 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CDYL2Q8N8U2 506 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 GLB1L3Q8NCI6 653 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 OR2I1PQ8NGU4 316 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CALML6Q8TD86 181 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 RAB24Q969Q5 203 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 MISP3Q96FF7 219 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PEX11GQ96HA9 241 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CDK5RAP3Q96JB5 506 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 NOL10Q9BSC4 688 aaKnown RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 C22orf23Q9BZE7 217 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PITHD1Q9GZP4 211 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 C19orf44Q9H6X5 657 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 GREM2Q9H772 168 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 ATP6V0A4Q9HBG4 840 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DCP1AQ9NPI6 582 aaPredicted RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 INCENPQ9NQS7 918 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PRDM7Q9NQW5 492 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DTLQ9NZJ0 730 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 RBPJLQ9UBG7 517 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 STAP2Q9UGK3 403 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SCOCQ9UIL1 159 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 GPR160Q9UJ42 338 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DBR1Q9UK59 544 aaKnown RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SYNPO2Q9UMS6 1093 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 LRCH1Q9Y2L9 728 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PCDHGB3Q9Y5G1 929 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 PCDHA13Q9Y5I0 950 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 SNX13Q9Y5W8 968 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 CFAP20Q9Y6A4 193 aaKnown RBP3.84□□□□□ -1.79
TRAV28-201ENST00000557548 DGKBQ9Y6T7 804 aa3.84□□□□□ -1.79
TRAV28-201ENST00000557548 LRRC10BA6NIK2 292 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 F8W031 263 aaPredicted RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 SRGAP3O43295 1099 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 SLC26A4O43511 780 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 CYBBP04839 570 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 CD8BP10966 210 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 TRHRP34981 398 aaPredicted RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 GPSM2P81274 684 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 TNFAIP2Q03169 654 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 PPP3CAQ08209 521 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 NOMO1Q15155 1222 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 NR0B2Q15466 257 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 PDCD2Q16342 344 aaPredicted RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 CCDC70Q6NSX1 233 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 CLEC4GQ6UXB4 293 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 ZNF574Q6ZN55 896 aaPredicted RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 TTLL10Q6ZVT0 673 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 NLRX1Q86UT6 975 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 LIX1LQ8IVB5 337 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 CCT6BQ92526 530 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 PHKBQ93100 1093 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 APIPQ96GX9 242 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 LRRC27Q9C0I9 530 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 BTBD1Q9H0C5 482 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 BCAS3Q9H6U6 928 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 C14orf93Q9H972 538 aaKnown RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 ZMAT3Q9HA38 289 aaKnown RBP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 TNFRSF12AQ9NP84 129 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.83□□□□□ -1.8
TRAV28-201ENST00000557548 FTSJ1Q9UET6 329 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 ANAPC4Q9UJX5 808 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 TPCN1Q9ULQ1 816 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 PCDHB1Q9Y5F3 818 aa3.83□□□□□ -1.8
TRAV28-201ENST00000557548 A0A088AWK7 358 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 A0A0A6YYJ9 748 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 ZNF839A8K0R7 811 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 LRG1P02750 347 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 SDHBP21912 280 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 XPAP23025 273 aaPredicted RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 ARL4AP40617 200 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 STAT5AP42229 794 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 STT3AP46977 705 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 GPR15P49685 360 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms