RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 SOX1O00570 391 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 TRAK2O60296 914 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 ZNF202O95125 648 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 RABGGTBP53611 331 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 SMTNP53814 917 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 ASIC1P78348 528 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 AMPD3Q01432 767 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 TWF2Q6IBS0 349 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 KRBA2Q6ZNG9 492 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 SLC24A5Q71RS6 500 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 FMR1NBQ8N0W7 255 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 PAGE5Q96GU1 130 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 TMEM134Q9H6X4 195 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
VIPAS39-210ENST00000557466 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 K7ERI5 159 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 ACKR2O00590 384 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 UPP2O95045 317 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 GJB5O95377 273 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 GAP43P17677 238 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 NMT1P30419 496 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 AXLP30530 894 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 PBX2P40425 430 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 SMAD3P84022 425 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 COASYQ13057 564 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 PRPF4BQ13523 1007 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 CUL4BQ13620 913 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 UBXN11Q5T124 520 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 NOTUMQ6P988 496 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 HAUS6Q7Z4H7 955 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 CDR2LQ86X02 465 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 FAM178BQ8IXR5 827 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 CRIPAKQ8N1N5 446 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 CNNM3Q8NE01 707 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 TOP1MTQ969P6 601 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 FAM105AQ9NUU6 356 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 SEL1LQ9UBV2 794 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 KCNG1Q9UIX4 513 aa16.35■□□□□ 0.21
VIPAS39-210ENST00000557466 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 ATF7P17544 494 aaPredicted RBP16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 FAM189BP81408 668 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 NT5DC1Q5TFE4 455 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 KCNN1Q92952 543 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 CCDC51Q96ER9 411 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 EIF2AQ9BY44 585 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 FGFBP2Q9BYJ0 223 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 PBX4Q9BYU1 374 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 PDZD7Q9H5P4 517 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 OLFML3Q9NRN5 406 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 TBC1D7Q9P0N9 293 aa16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 YBX2Q9Y2T7 364 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-210ENST00000557466 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.21
VIPAS39-210ENST00000557466 A0A0U1RQF3 1178 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 A0A1B0GUA9 196 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 H0YCG3 227 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 NR1I2O75469 434 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 STAG3L1P0CL83 205 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 MYOGP15173 224 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 GATMP50440 423 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 RAB27AP51159 221 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 UBE2HP62256 183 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 NCBP1Q09161 790 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 TMEM132AQ24JP5 1023 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 HERC4Q5GLZ8 1057 aaPredicted RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 EEF1DP3Q658K8 133 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 ZNF598Q86UK7 904 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 LRCH3Q96II8 777 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 ZBED2Q9BTP6 218 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 RC3H2Q9HBD1 1191 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 TMEM161AQ9NX61 479 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 PCDHA11Q9Y5I1 949 aa16.33■□□□□ 0.2
VIPAS39-210ENST00000557466 LCHNA4D1U4 455 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 N4BP3O15049 544 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 TLL1O43897 1013 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 PPP1R37O75864 691 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 NPTXRO95502 500 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 DNAJB2P25686 324 aa16.32■□□□□ 0.2
VIPAS39-210ENST00000557466 CASP5P51878 434 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms