RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	PHOX2B	Q99453	314 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	NRDE2	Q9H7Z3	1164 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	CYP26B1	Q9NR63	512 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	TBC1D13	Q9NVG8	400 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	DACT1	Q9NYF0	836 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	DNAJB4	Q9UDY4	337 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	TPCN1	Q9ULQ1	816 aa		12.53	□□□□□ -0.4
HNRNPC-231	ENST00000557336	FSD2	A1L4K1	749 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CPLX1	O14810	134 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	GALT	P07902	379 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	FDPS	P14324	419 aa	Known RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	HOXB8	P17481	243 aa	Predicted RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	QARS	P47897	775 aa	Known RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	MRE11	P49959	708 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PSMC5	P62195	406 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CDC42EP1	Q00587	391 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	LETM2	Q2VYF4	491 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	UBXN11	Q5T124	520 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PPP4R3A	Q6IN85	833 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	AGMO	Q6ZNB7	445 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	KRT25	Q7Z3Z0	450 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ZNF410	Q86VK4	478 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ZNF280B	Q86YH2	543 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SLC22A17	Q8WUG5	538 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PRPF31	Q8WWY3	499 aa	Known RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PBXIP1	Q96AQ6	731 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SCLT1	Q96NL6	688 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ZBP1	Q9H171	429 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	DHX33	Q9H6R0	707 aa	Known RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PDRG1	Q9NUG6	133 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	FAM105A	Q9NUU6	356 aa		12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PIN4	Q9Y237	131 aa	Known RBP	12.52	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PFKFB2	O60825	505 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	DDHD2	O94830	711 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CXCL14	O95715	111 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	WEE2	P0C1S8	567 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SLC11A1	P49279	550 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ALDH7A1	P49419	539 aa	Known RBP	12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	DNM2	P50570	870 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SMC1A	Q14683	1233 aa	Known RBP	12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PTPN21	Q16825	1174 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	NOMO2	Q5JPE7	1267 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	MRPL10	Q7Z7H8	261 aa	Known RBP	12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	VPS52	Q8N1B4	723 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	C12orf76	Q8N812	135 aa	Predicted RBP	12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TNFRSF25	Q93038	417 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TMEM143	Q96AN5	459 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	IGSF21	Q96ID5	467 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	FAM20A	Q96MK3	541 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	NLRP4	Q96MN2	994 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	MRPL9	Q9BYD2	267 aa	Known RBP	12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ADAM7	Q9H2U9	754 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	POMK	Q9H5K3	350 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	AGPAT5	Q9NUQ2	364 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	RGL1	Q9NZL6	768 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	IRAK3	Q9Y616	596 aa		12.51	□□□□□ -0.41
HNRNPC-231	ENST00000557336	WNT7A	O00755	349 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	LILRB3	O75022	631 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PDGFB	P01127	241 aa	Predicted RBP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	EPCAM	P16422	314 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SFPQ	P23246	707 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SP100	P23497	879 aa	Predicted RBP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	VCP	P55072	806 aa	Known RBP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SIGLEC14	Q08ET2	396 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TCF15	Q12870	199 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TWF2	Q6IBS0	349 aa	Known RBP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CATSPER4	Q7RTX7	472 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	NEK8	Q86SG6	692 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	DDX53	Q86TM3	631 aa	Known RBP	12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	FBXL6	Q8N531	539 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CASP10	Q92851	521 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SMOC2	Q9H3U7	446 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	XPNPEP1	Q9NQW7	623 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PCDHB2	Q9Y5E7	798 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	COL4A3BP	Q9Y5P4	624 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	STK36	Q9NRP7	1315 aa		12.5	□□□□□ -0.41
HNRNPC-231	ENST00000557336	C2CD4D	B7Z1M9	353 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TBX3	O15119	743 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SLITRK3	O94933	977 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	EFEMP2	O95967	443 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	P4HB	P07237	508 aa	Known RBP	12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SRGAP2C	P0DJJ0	459 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CTSA	P10619	480 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	GCFC2	P16383	781 aa	Known RBP	12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	POLG	P54098	1239 aa	Predicted RBP	12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	LAMTOR4	Q0VGL1	99 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	NR5A1	Q13285	461 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	EPHA7	Q15375	998 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	GLB1L	Q6UWU2	654 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	PIK3AP1	Q6ZUJ8	805 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	C4orf19	Q8IY42	314 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	SMG8	Q8ND04	991 aa	Known RBP	12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	TMEM169	Q96HH4	297 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	DYDC2	Q96IM9	177 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	CEP170P1	Q96L14	293 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	LXN	Q9BS40	222 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	ADAM33	Q9BZ11	813 aa		12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	INO80B	Q9C086	356 aa	Predicted RBP	12.49	□□□□□ -0.41
HNRNPC-231	ENST00000557336	INPP5F	Q9Y2H2	1132 aa		12.49	□□□□□ -0.41

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