RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SPATA31A5Q5VU36 1347 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 SPATA31A7Q8IWB4 1347 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 SPHKAPQ2M3C7 1700 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 DAPK1P53355 1430 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 KCNK3O14649 394 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 B4GALT4O60513 344 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 H2AFYO75367 372 aaKnown RBP5.26□□□□□ -1.57
CHD8-212ENST00000557329 KRT37O76014 449 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 MPIG6BO95866 241 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 HSPA6P17066 643 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 SOX5P35711 763 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 IL13RA1P78552 427 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 FAPQ12884 760 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 NFYCQ13952 458 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 DHCR24Q15392 516 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 SEC23AQ15436 765 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 TBC1D10BQ4KMP7 808 aaPredicted RBP5.26□□□□□ -1.57
CHD8-212ENST00000557329 KANK2Q63ZY3 851 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 SDE2Q6IQ49 451 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 CNNM4Q6P4Q7 775 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 C7orf31Q8N865 590 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 C16orf92Q96LL3 132 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 BDH2Q9BUT1 245 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 AMNQ9BXJ7 453 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 WNT8AQ9H1J5 351 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 KCMF1Q9P0J7 381 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 LMTK2Q8IWU2 1503 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
CHD8-212ENST00000557329 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.26□□□□□ -1.57
CHD8-212ENST00000557329 ZEB2O60315 1214 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 KPNA6O60684 536 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 PRLP01236 227 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 LSP1P33241 339 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 LSSP48449 732 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 RAC3P60763 192 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 PHC1P78364 1004 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 MOGSQ13724 837 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 MAN2A1Q16706 1144 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 DGKDQ16760 1214 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 TKFCQ3LXA3 575 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 HS1BP3Q53T59 392 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 TRIM68Q6AZZ1 485 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 RTN4RL1Q86UN2 441 aaPredicted RBP5.25□□□□□ -1.57
CHD8-212ENST00000557329 FERMT3Q86UX7 667 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 CIR1Q86X95 450 aaPredicted RBP5.25□□□□□ -1.57
CHD8-212ENST00000557329 RTKN2Q8IZC4 609 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 RSAD2Q8WXG1 361 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 TUBGCP5Q96RT8 1024 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 CDK5RAP1Q96SZ6 601 aaKnown RBP5.25□□□□□ -1.57
CHD8-212ENST00000557329 ADAM7Q9H2U9 754 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 SAE1Q9UBE0 346 aaPredicted RBP5.25□□□□□ -1.57
CHD8-212ENST00000557329 NUP155O75694 1391 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 PARD3Q8TEW0 1356 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 ADGRL2O95490 1459 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 PXDNQ92626 1479 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 CEP350Q5VT06 3117 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 ADGRB2O60241 1585 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 CHD4Q14839 1912 aa5.25□□□□□ -1.57
CHD8-212ENST00000557329 ANKRD50Q9ULJ7 1429 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 USP32Q8NFA0 1604 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 PRICKLE3O43900 615 aaPredicted RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 GYS2P54840 703 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 DSG1Q02413 1049 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 KLHDC10Q6PID8 442 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 USP30Q70CQ3 517 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 DDX46Q7L014 1031 aaKnown RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 BMP8AQ7Z5Y6 402 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 DHX37Q8IY37 1157 aaKnown RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 NGDNQ8NEJ9 315 aaKnown RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 CHST13Q8NET6 341 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 FOXRED1Q96CU9 486 aaPredicted RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 RBM15Q96T37 977 aaKnown RBP eCLIP5.24□□□□□ -1.57
CHD8-212ENST00000557329 TARS2Q9BW92 718 aaKnown RBP5.24□□□□□ -1.57
CHD8-212ENST00000557329 OR10A2Q9H208 303 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 TMPRSS5Q9H3S3 457 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 CAAP1Q9H8G2 361 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 OXSMQ9NWU1 459 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 NRKQ7Z2Y5 1582 aa5.24□□□□□ -1.57
CHD8-212ENST00000557329 CCDC144AA2RUR9 1427 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 XRN1Q8IZH2 1706 aaKnown RBP5.23□□□□□ -1.57
CHD8-212ENST00000557329 RASSF10A6NK89 507 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 PDE8AO60658 829 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 ULK1O75385 1050 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 ATP2A2P16615 1042 aaKnown RBP5.23□□□□□ -1.57
CHD8-212ENST00000557329 MC4RP32245 332 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 CD83Q01151 205 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 SLC6A3Q01959 620 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 EFEMP1Q12805 493 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 CCDC178Q5BJE1 867 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 ERCC4Q92889 916 aaPredicted RBP5.23□□□□□ -1.57
CHD8-212ENST00000557329 USP7Q93009 1102 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 LMF1Q96S06 567 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 ELF4Q99607 663 aaPredicted RBP5.23□□□□□ -1.57
CHD8-212ENST00000557329 MTFR1LQ9H019 292 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 TOMM22Q9NS69 142 aa5.23□□□□□ -1.57
CHD8-212ENST00000557329 PUF60Q9UHX1 559 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms