RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 GDAQ9Y2T3 454 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 SQORQ9Y6N5 450 aa10.7□□□□□ -0.7
TMEM260-213ENST00000556929 ADGRA3Q8IWK6 1321 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 RPS6KA5O75582 802 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 ERLIN2O94905 339 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 PRPF6O94906 941 aaKnown RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 CHRNA1P02708 482 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 PRKCBP05771 671 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 MYBP10242 640 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 DARSP14868 501 aaKnown RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 MBTD1Q05BQ5 628 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 ZC2HC1CQ53FD0 456 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 CT47A1Q5JQC4 288 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 LRRC8DQ7L1W4 858 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 EPM2AIP1Q7L775 607 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 SYCP3Q8IZU3 236 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 KIFC3Q9BVG8 833 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 NOC4LQ9BVI4 516 aaKnown RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 PRDM5Q9NQX1 630 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-213ENST00000556929 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
TMEM260-213ENST00000556929 SCN5AQ14524 2016 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 ACKR2O00590 384 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 PSMA7O14818 248 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 GPR182O15218 404 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 PPP1R37O75864 691 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 IQCF3P0C7M6 154 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 RAG1P15918 1043 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 AXLP30530 894 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 PRCPP42785 496 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 CASP5P51878 434 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 TYRO3Q06418 890 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 PRPF4BQ13523 1007 aaKnown RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 FAM187BQ17R55 369 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 KNOP1Q1ED39 458 aaKnown RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 FBXO47Q5MNV8 452 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 CATSPER4Q7RTX7 472 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 MAP4K3Q8IVH8 894 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 SMYD4Q8IYR2 804 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 BICD1Q96G01 975 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 DHTKD1Q96HY7 919 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 TSG101Q99816 390 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 MRPL4Q9BYD3 311 aaKnown RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 NAT10Q9H0A0 1025 aaKnown RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 FZD8Q9H461 694 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 CGNQ9P2M7 1197 aaKnown RBP10.68□□□□□ -0.7
TMEM260-213ENST00000556929 TBX21Q9UL17 535 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 MAPK8IP1Q9UQF2 711 aa10.68□□□□□ -0.7
TMEM260-213ENST00000556929 BICDL2A1A5D9 508 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 PDXKO00764 312 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 HNRNPDLO14979 420 aaKnown RBP10.67□□□□□ -0.7
TMEM260-213ENST00000556929 KIAA0355O15063 1070 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 CALUO43852 315 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-213ENST00000556929 EVI5O60447 810 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 TIMP1P01033 207 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 BMP6P22004 513 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 RFC2P35250 354 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 LIG4P49917 911 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 SNRPFP62306 86 aaKnown RBP10.67□□□□□ -0.7
TMEM260-213ENST00000556929 PAK2Q13177 524 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 LRSAM1Q6UWE0 723 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 ZPBP2Q6X784 338 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 TSHZ1Q6ZSZ6 1077 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 ADSSL1Q8N142 457 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 GLIS3Q8NEA6 775 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 GOLGA5Q8TBA6 731 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 FGFBP2Q9BYJ0 223 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 GBP3Q9H0R5 595 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 MINDY3Q9H8M7 445 aa10.67□□□□□ -0.7
TMEM260-213ENST00000556929 TYW1Q9NV66 732 aaKnown RBP10.67□□□□□ -0.7
TMEM260-213ENST00000556929 NOC2LQ9Y3T9 749 aaKnown RBP10.67□□□□□ -0.7
TMEM260-213ENST00000556929 CNTNAP2Q9UHC6 1331 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 N4BP3O15049 544 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 CSDE1O75534 798 aaKnown RBP10.66□□□□□ -0.7
TMEM260-213ENST00000556929 CAVIN2O95810 425 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 PIGRP01833 764 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 GHRP10912 638 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 ZSCAN20P17040 1043 aaPredicted RBP10.66□□□□□ -0.7
TMEM260-213ENST00000556929 FGFR4P22455 802 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 CCNE1P24864 410 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 CYP2C18P33260 490 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 MATR3P43243 847 aaKnown RBP eCLIP10.66□□□□□ -0.7
TMEM260-213ENST00000556929 CCL23P55773 120 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 ZNF445P59923 1031 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
TMEM260-213ENST00000556929 PAK1Q13153 545 aa10.66□□□□□ -0.7
TMEM260-213ENST00000556929 LPIN1Q14693 890 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms