RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NXPE1Q8N323 547 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ANKRD53Q8N9V6 530 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 CHST14Q8NCH0 376 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 C8orf48Q96LL4 319 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ASPSCR1Q9BZE9 553 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 SLC6A15Q9H2J7 730 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 AASDHPPTQ9NRN7 309 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 VWA7Q9Y334 891 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 UBE2QL1A1L167 161 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 ZNF891A8MT65 544 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 PRC1O43663 620 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 MAFO75444 373 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 FKBP9O95302 570 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 KCNA6P17658 529 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 SDHAP31040 664 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 LSSP48449 732 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 RABGGTBP53611 331 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 BPIFB4P59827 614 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 NFE2Q16621 373 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 SYDE2Q5VT97 1194 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 ABHD17CQ6PCB6 329 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 FAM111BQ6SJ93 734 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 LHFPL2Q6ZUX7 228 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 FKBP9P1Q75LS8 142 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 RTN4RL1Q86UN2 441 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 PASD1Q8IV76 773 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 GSPT2Q8IYD1 628 aaKnown RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 CNTD1Q8N815 330 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 C2orf69Q8N8R5 385 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 CALML6Q8TD86 181 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 CHMP4CQ96CF2 233 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 FOXRED1Q96CU9 486 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 SLC7A6OSQ96CW6 309 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 GPR101Q96P66 508 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-210ENST00000556718 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
PRPF39-210ENST00000556718 PTPDC1A2A3K4 754 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 KLRG2A4D1S0 409 aaPredicted RBP5.7□□□□□ -1.5
PRPF39-210ENST00000556718 TRAF5O00463 557 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 GCP02774 474 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 ALDH6A1Q02252 535 aaKnown RBP5.7□□□□□ -1.5
PRPF39-210ENST00000556718 DSG1Q02413 1049 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 C1QL3Q5VWW1 255 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 OVCH1Q7RTY7 1134 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 HAS1Q92839 578 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 THG1LQ9NWX6 298 aaKnown RBP5.7□□□□□ -1.5
PRPF39-210ENST00000556718 TRHDEQ9UKU6 1024 aa5.7□□□□□ -1.5
PRPF39-210ENST00000556718 KIF3BO15066 747 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 TSPAN6O43657 245 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 H2AFYO75367 372 aaKnown RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 NR4A1P22736 598 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 LMO1P25800 156 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 PTGS2P35354 604 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 ID4P47928 161 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 MCL1Q07820 350 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 RHOUQ7L0Q8 258 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 HDGFL2Q7Z4V5 671 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 ELOA2Q8IYF1 753 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 CHPFQ8IZ52 775 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 SLC25A43Q8WUT9 341 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 GCDHQ92947 438 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 LPPQ93052 612 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 CHMP4AQ9BY43 222 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 SAE1Q9UBE0 346 aaPredicted RBP5.69□□□□□ -1.5
PRPF39-210ENST00000556718 TRPS1Q9UHF7 1281 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 DENND2AQ9ULE3 1009 aa5.69□□□□□ -1.5
PRPF39-210ENST00000556718 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.68□□□□□ -1.5
PRPF39-210ENST00000556718 CCDC194A0A1B0GVG4 234 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 SLC12A8A0AV02 714 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 GOLGA8BA8MQT2 603 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 H7C1D1 291 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 NUDT3O95989 172 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 FBLP22087 321 aaKnown RBP5.68□□□□□ -1.5
PRPF39-210ENST00000556718 CCND1P24385 295 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 RGS3P49796 1198 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 SESN3P58005 492 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 ZNF174Q15697 407 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 RABL3Q5HYI8 236 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 CCDC146Q8IYE0 955 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 ZNF276Q8N554 614 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 COG1Q8WTW3 980 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 CHTF18Q8WVB6 975 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
PRPF39-210ENST00000556718 MNTQ99583 582 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 TCF25Q9BQ70 676 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 IL23AQ9NPF7 189 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 ZIM2Q9NZV7 527 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
PRPF39-210ENST00000556718 SHTN1A0MZ66 631 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 GOLGA6CA6NDK9 693 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 GOLGA6BA6NDN3 693 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms