RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 FAM189BP81408 668 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 UBE3AQ05086 875 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 HYAL1Q12794 435 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 NR5A1Q13285 461 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 DSC3Q14574 896 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 CALCRLQ16602 461 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM102BQ5T8I3 360 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 PLA2G4FQ68DD2 849 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 ECHDC2Q86YB7 292 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 C4orf19Q8IY42 314 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 DIS3L2Q8IYB7 885 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 NSUN7Q8NE18 718 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 SPPL3Q8TCT6 385 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 NEK9Q8TD19 979 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 TCP11Q8WWU5 503 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 NLRP4Q96MN2 994 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 CCDC43Q96MW1 224 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FDXACB1Q9BRP7 624 aaPredicted RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 CHST12Q9NRB3 414 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 TYW1Q9NV66 732 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 PCDHA12Q9UN75 941 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 EYSQ5T1H1 3165 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 EML1O00423 815 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ASAP2O43150 1006 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 FGF18O76093 207 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 LARGE1O95461 756 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 FDPSP14324 419 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 IL9P15248 144 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 PPM1AP35813 382 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 RFC5P40937 340 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 NPEPPSP55786 919 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 KRT17Q04695 432 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 XKR9Q5GH70 373 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 TWF2Q6IBS0 349 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ANO5Q75V66 913 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 CATSPER4Q7RTX7 472 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 TPH2Q8IWU9 490 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 GJD3Q8N144 294 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 PSPC1Q8WXF1 523 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 RSPH1Q8WYR4 309 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 HAS1Q92839 578 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 DYDC2Q96IM9 177 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 LXNQ9BS40 222 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 MRPL9Q9BYD2 267 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ZSWIM4Q9H7M6 989 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 TLR9Q9NR96 1032 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 VAV3Q9UKW4 847 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 LIMCH1Q9UPQ0 1083 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 PIN4Q9Y237 131 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 COL4A3BPQ9Y5P4 624 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 ARID2Q68CP9 1835 aa8.59□□□□□ -1.03
HNRNPC-226ENST00000556628 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 TRANK1O15050 2925 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CARNS1A5YM72 827 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 NEMFO60524 1076 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 JAK2O60674 1132 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CSDE1O75534 798 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 STBD1O95210 358 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 SRGAP2BP0DMP2 458 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 DNAJB1P25685 340 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 YWHABP31946 246 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 NRIP1P48552 1158 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 RAB27AP51159 221 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 USP46P62068 366 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CYP4A11Q02928 519 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 NCBP1Q09161 790 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 ADAM15Q13444 863 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 DRP2Q13474 957 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CLUL1Q15846 466 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 EARS2Q5JPH6 523 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 SRGAP1Q7Z6B7 1085 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 RBM23Q86U06 439 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 HELQQ8TDG4 1101 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 PGBD4Q96DM1 585 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 ZSCAN31Q96LW9 406 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 CASD1Q96PB1 797 aa8.58□□□□□ -1.04
HNRNPC-226ENST00000556628 POP1Q99575 1024 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms