RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CNKSR3Q6P9H4 555 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 GDAQ9Y2T3 454 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 WDR81Q562E7 1941 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 TTLL13PA6NNM8 815 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 ZBBXA8MT70 800 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 ACKR2O00590 384 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 FGBP02675 491 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 EDN1P05305 212 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 ACTN1P12814 892 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 GTF2BQ00403 316 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 PSMD2Q13200 908 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 AMHR2Q16671 573 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 L1TD1Q5T7N2 865 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 TWF2Q6IBS0 349 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 SMYD4Q8IYR2 804 aaPredicted RBP15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 SYCP3Q8IZU3 236 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 APBB2Q92870 758 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 VWCEQ96DN2 955 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 TARS2Q9BW92 718 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 TMX1Q9H3N1 280 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 KIAA1468Q9P260 1216 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 MAN1B1Q9UKM7 699 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 MAPK8IP1Q9UQF2 711 aa15.43■□□□□ 0.06
VIPAS39-208ENST00000556412 HNRNPDLO14979 420 aaKnown RBP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ARF4P18085 180 aaPredicted RBP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ABCD1P33897 745 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 MATR3P43243 847 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 KCNA1Q09470 495 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ALCAMQ13740 583 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 IKBKEQ14164 716 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 PCBP1Q15365 356 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 PSRC1Q6PGN9 363 aaPredicted RBP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 C16orf59Q7L2K0 433 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 KIAA0895Q8NCT3 520 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 SYAP1Q96A49 352 aaPredicted RBP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ACCSQ96QU6 501 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ADAM2Q99965 735 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ST6GALNAC4Q9H4F1 302 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 TMEM63CQ9P1W3 806 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ANKFY1Q9P2R3 1169 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 CNTNAP2Q9UHC6 1331 aa15.42■□□□□ 0.06
VIPAS39-208ENST00000556412 ALPK3Q96L96 1907 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 MGEA5O60502 916 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 HARSP12081 509 aaKnown RBP15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 SCP2P22307 547 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 SARSP49591 514 aaKnown RBP15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 LIG4P49917 911 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 NT5DC1Q5TFE4 455 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 NOTUMQ6P988 496 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 MAP4K3Q8IVH8 894 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 SPATA20Q8TB22 786 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 TCHPQ9BT92 498 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 FTHL17Q9BXU8 183 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 IKZF4Q9H2S9 585 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 EXOC7Q9UPT5 735 aa15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 TRIP12Q14669 1992 aaPredicted RBP15.41■□□□□ 0.06
VIPAS39-208ENST00000556412 PPP1R37O75864 691 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 SKOR2Q2VWA4 1001 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 ZNF658Q5TYW1 1059 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 ZBTB33Q86T24 672 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 MYOCDQ8IZQ8 938 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 LOXHD1Q8IVV2 1947 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 EIF3DO15371 548 aaKnown RBP eCLIP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 AXLP30530 894 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 EPM2AIP1Q7L775 607 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 RNF169Q8NCN4 708 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 ACO2Q99798 780 aaKnown RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 STRA6Q9BX79 667 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 PDZD7Q9H5P4 517 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 CHST12Q9NRB3 414 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 KAT6AQ92794 2004 aa15.4■□□□□ 0.06
VIPAS39-208ENST00000556412 ABHD14A-ACY1A0A1B0GW23 586 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 TISP43B9A030 160 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 N4BP3O15049 544 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 NPTXRO95502 500 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 KCNJ6P48051 423 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 ZNF568Q3ZCX4 644 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 EEF1DP3Q658K8 133 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 SLC27A1Q6PCB7 646 aa15.39■□□□□ 0.05
VIPAS39-208ENST00000556412 LINC01599Q8WXQ3 324 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms