RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
SLIRP-206ENST00000556375 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 B4GALT5O43286 388 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 HIP1RO75146 1068 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 ITGB1P05556 798 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 PPM1AP35813 382 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 MAPK7Q13164 816 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 SKIV2LQ15477 1246 aaKnown RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 MAPK6Q16659 721 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 DAW1Q8N136 415 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 USP28Q96RU2 1077 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 FZD8Q9H461 694 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 ALG13Q9NP73 1137 aaKnown RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
SLIRP-206ENST00000556375 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-206ENST00000556375 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SSBP05455 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 PRKCBP05771 671 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 PLCG1P19174 1290 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 EFNA5P52803 228 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 UBE3AQ05086 875 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SLC27A1Q6PCB7 646 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SMG8Q8ND04 991 aaKnown RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 PLIN2Q99541 437 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 RSAD1Q9HA92 442 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 C17orf75Q9HAS0 396 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 COG5Q9UP83 839 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 IPPQ9Y573 584 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 SRPRBQ9Y5M8 271 aaKnown RBP12.73□□□□□ -0.37
SLIRP-206ENST00000556375 TTC28Q96AY4 2481 aa12.73□□□□□ -0.37
SLIRP-206ENST00000556375 VCANP13611 3396 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 CARNS1A5YM72 827 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 ACKR2O00590 384 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 N4BP3O15049 544 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 INPPL1O15357 1258 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 OFD1O75665 1012 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 FGF18O76093 207 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 ZSCAN22P10073 491 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-206ENST00000556375 NPTX2P47972 431 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 PEX3P56589 373 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
SLIRP-206ENST00000556375 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
SLIRP-206ENST00000556375 CAMK1Q14012 370 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 SLC39A14Q15043 492 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
SLIRP-206ENST00000556375 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 POF1BQ8WVV4 589 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-206ENST00000556375 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
SLIRP-206ENST00000556375 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 NPTXRO95502 500 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 F13A1P00488 732 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 EDN1P05305 212 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 ITGA4P13612 1032 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 DNAJB1P25685 340 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 TXLNAP40222 546 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 PBX3P40426 434 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 PLCB3Q01970 1234 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 RNASELQ05823 741 aaKnown RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms