RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 DLX2Q07687 328 aaPredicted RBP14.01□□□□□ -0.17
SNX6-207ENST00000556303 GIT2Q14161 759 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 ZNF174Q15697 407 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 SMRP1Q8NCR6 262 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 URGCPQ8TCY9 931 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 TCF25Q9BQ70 676 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 RAB34Q9BZG1 259 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 CLEC1BQ9P126 229 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 HCSTQ9UBK5 93 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 PLXNA4Q9HCM2 1894 aa14.01□□□□□ -0.17
SNX6-207ENST00000556303 BCAR1P56945 870 aa14□□□□□ -0.17
SNX6-207ENST00000556303 ZP2Q05996 745 aa14□□□□□ -0.17
SNX6-207ENST00000556303 KCNC3Q14003 757 aa14□□□□□ -0.17
SNX6-207ENST00000556303 SMC1AQ14683 1233 aaKnown RBP14□□□□□ -0.17
SNX6-207ENST00000556303 TMC7Q7Z402 723 aa14□□□□□ -0.17
SNX6-207ENST00000556303 HACE1Q8IYU2 909 aa14□□□□□ -0.17
SNX6-207ENST00000556303 C4orf32Q8N8J7 132 aa14□□□□□ -0.17
SNX6-207ENST00000556303 MRPL43Q8N983 215 aaKnown RBP14□□□□□ -0.17
SNX6-207ENST00000556303 PIGOQ8TEQ8 1089 aa14□□□□□ -0.17
SNX6-207ENST00000556303 TMEM169Q96HH4 297 aa14□□□□□ -0.17
SNX6-207ENST00000556303 PRIMPOLQ96LW4 560 aa14□□□□□ -0.17
SNX6-207ENST00000556303 TMEM175Q9BSA9 504 aa14□□□□□ -0.17
SNX6-207ENST00000556303 RSAD1Q9HA92 442 aa14□□□□□ -0.17
SNX6-207ENST00000556303 ENTPD7Q9NQZ7 604 aa14□□□□□ -0.17
SNX6-207ENST00000556303 TBC1D13Q9NVG8 400 aa14□□□□□ -0.17
SNX6-207ENST00000556303 IRAK3Q9Y616 596 aa14□□□□□ -0.17
SNX6-207ENST00000556303 ZMYM2Q9UBW7 1377 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 INO80B-WBP1J3KQ70 363 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 INPPL1O15357 1258 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 LINC01565O15544 149 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 TSPAN1O60635 241 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 GPR37L1O60883 481 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 MED24O75448 989 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 GALTP07902 379 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 HOXB8P17481 243 aaPredicted RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 GLRA2P23416 452 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 RNASELQ05823 741 aaKnown RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 CAPSQ13938 189 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 FAM187BQ17R55 369 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 UBXN11Q5T124 520 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 AGMOQ6ZNB7 445 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 DDX53Q86TM3 631 aaKnown RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 RBM23Q86U06 439 aaKnown RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 KCTD17Q8N5Z5 321 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 LPPQ93052 612 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 IGSF21Q96ID5 467 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 CSRNP2Q9H175 543 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 C2orf40Q9H1Z8 148 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 CD320Q9NPF0 282 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
SNX6-207ENST00000556303 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
SNX6-207ENST00000556303 PER2O15055 1255 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 ZC3H11AO75152 810 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNX6-207ENST00000556303 CSPG5O95196 566 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 GLP2RO95838 553 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 ALDH2P05091 517 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 ITGA4P13612 1032 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 CYP11B2P19099 503 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 PRPHP41219 470 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 AMHR2Q16671 573 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 PLPP4Q5VZY2 271 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 CDCA2Q69YH5 1023 aaPredicted RBP13.98□□□□□ -0.17
SNX6-207ENST00000556303 IGSF22Q8N9C0 903 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 ASAP3Q8TDY4 903 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 FAM193BQ96PV7 902 aaPredicted RBP13.98□□□□□ -0.17
SNX6-207ENST00000556303 EPHX3Q9H6B9 360 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
SNX6-207ENST00000556303 LRWD1Q9UFC0 647 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
SNX6-207ENST00000556303 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 ARHGEF35A5YM69 484 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 C2orf71A6NGG8 1288 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
SNX6-207ENST00000556303 CTSAP10619 480 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 PBX3P40426 434 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 PTGDRQ13258 359 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 PPP2R5AQ15172 486 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 SLC27A1Q6PCB7 646 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 VPS52Q8N1B4 723 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
SNX6-207ENST00000556303 CASP10Q92851 521 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
SNX6-207ENST00000556303 ZBP1Q9H171 429 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 POLR3FQ9H1D9 316 aaPredicted RBP13.97□□□□□ -0.17
SNX6-207ENST00000556303 FZD8Q9H461 694 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 INPP5FQ9Y2H2 1132 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 IPPQ9Y573 584 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.97□□□□□ -0.17
SNX6-207ENST00000556303 PCDHGC5Q9Y5F6 944 aa13.97□□□□□ -0.17
SNX6-207ENST00000556303 HIDE1A8MVS5 230 aa13.96□□□□□ -0.17
SNX6-207ENST00000556303 ARF4P18085 180 aaPredicted RBP13.96□□□□□ -0.17
SNX6-207ENST00000556303 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms