RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 TULP1O00294 542 aaPredicted RBP20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 NDUFA10O95299 355 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 ADRB2P07550 413 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 KRT13P13646 458 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 HNRNPH3P31942 346 aaKnown RBP20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 SREBF2Q12772 1141 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 INTS8Q75QN2 995 aaKnown RBP20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 SMC1BQ8NDV3 1235 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 POMGNT1Q8WZA1 660 aa20.34■□□□□ 0.85
SDR39U1-218ENST00000556262 H0YCG3 227 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 HBP1O60381 514 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 CYP2B6P20813 491 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 VAMP7P51809 220 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 IGBP1P78318 339 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 SNRNP35Q16560 246 aaKnown RBP20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 BRDTQ58F21 947 aaPredicted RBP20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 KCNG1Q9UIX4 513 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 PPME1Q9Y570 386 aa20.33■□□□□ 0.84
SDR39U1-218ENST00000556262 IGKV6-21A0A0C4DH24 114 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 K7ERI5 159 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 EDN1P05305 212 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 GJB1P08034 283 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 STRN3Q13033 797 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 KLHDC7AQ5VTJ3 777 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 CYP4F22Q6NT55 531 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 TRIM65Q6PJ69 517 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 USP6NLQ92738 828 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 SIX2Q9NPC8 291 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 LZTFL1Q9NQ48 299 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 PLCB1Q9NQ66 1216 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 ARHGAP20Q9P2F6 1191 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 REXO2Q9Y3B8 237 aaKnown RBP20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 DNAH12Q6ZR08 3092 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 GTPBP10A4D1E9 387 aaKnown RBP20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 SRGAP2CP0DJJ0 459 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 UCHL3P15374 230 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 CTGFP29279 349 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 CYP2C19P33261 490 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 LAMTOR4Q0VGL1 99 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 C1orf220Q5T0J3 134 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 IER5Q5VY09 327 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 IQSEC1Q6DN90 963 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 GJB7Q6PEY0 223 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 OR6J1Q8NGC5 347 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 C16orf70Q9BSU1 422 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 FHOD1Q9Y613 1164 aa20.32■□□□□ 0.84
SDR39U1-218ENST00000556262 ABL1P00519 1130 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 INSRRP14616 1297 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 TM4SF4P48230 202 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 LIG4P49917 911 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 CDK17Q00537 523 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 TNFAIP2Q03169 654 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 PPP3CAQ08209 521 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 MSL3Q8N5Y2 521 aaKnown RBP20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 METTL13Q8N6R0 699 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 PSPC1Q8WXF1 523 aaKnown RBP20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 ZNF668Q96K58 619 aaPredicted RBP20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 ARID3AQ99856 593 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 AJAP1Q9UKB5 411 aaPredicted RBP20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 GJD2Q9UKL4 321 aa20.31■□□□□ 0.84
SDR39U1-218ENST00000556262 SIP14410 1827 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 MAPK13O15264 365 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 ADCY3O60266 1144 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 PPFIA4O75335 1185 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 HOXC6P09630 235 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 CLCN3P51790 818 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 MYL7Q01449 175 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 LENG1Q96BZ8 264 aaPredicted RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 ZBTB45Q96K62 511 aaPredicted RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 IRX2Q9BZI1 471 aaPredicted RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 TNPO2O14787 897 aaKnown RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 MMP3P08254 477 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 ABCD1P33897 745 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 GCLMP48507 274 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 ARID5AQ03989 594 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 RAPGEF1Q13905 1077 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 SFMBT2Q5VUG0 894 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 EFCAB12Q6NXP0 572 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 RHPN2Q8IUC4 686 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 RNF149Q8NC42 400 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 TCP11Q8WWU5 503 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 CCDC127Q96BQ5 260 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 TARS2Q9BW92 718 aaKnown RBP20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 HAPLN2Q9GZV7 340 aa20.3■□□□□ 0.84
SDR39U1-218ENST00000556262 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 H3BRB1 525 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 GAS2O43903 313 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 GARTP22102 1010 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 EIF4A3P38919 411 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 HGSNATQ68CP4 663 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 CCDC170Q8IYT3 715 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 KCNN1Q92952 543 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 CCDC42Q96M95 316 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 FBXL18Q96ME1 805 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 POP1Q99575 1024 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 FAM213AQ9BRX8 229 aa20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 TUT1Q9H6E5 874 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-218ENST00000556262 TFR2Q9UP52 801 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms