RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GAGE12BA1L429 117 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 LEFTY2O00292 366 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 KCNQ2O43526 872 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 CYP17A1P05093 508 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 GAAP10253 952 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 PTX3P26022 381 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 PLA2G5P39877 138 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 CASRP41180 1078 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 ELLP55199 621 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 MAN2A1Q16706 1144 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 ERCC6LQ2NKX8 1250 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 BEAN1Q3B7T3 259 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 ZC3H12BQ5HYM0 836 aaKnown RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 ZNF362Q5T0B9 420 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 KANSL1Q7Z3B3 1105 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 CKAP2LQ8IYA6 745 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 BOLLQ8N9W6 283 aaKnown RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 OR5M3Q8NGP4 307 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 NELL1Q92832 810 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 DCLRE1CQ96SD1 692 aaKnown RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 MTG2Q9H4K7 406 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 ALG13Q9NP73 1137 aaKnown RBP5.26□□□□□ -1.57
SCFD1-218ENST00000556256 CHST2Q9Y4C5 530 aa5.26□□□□□ -1.57
SCFD1-218ENST00000556256 NRP1O14786 923 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 FSBPO95073 299 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 HKR1P10072 659 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 CXCR5P32302 372 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 BMPR1AP36894 532 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 ADCY2Q08462 1091 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 MRPL49Q13405 166 aaKnown RBP5.25□□□□□ -1.57
SCFD1-218ENST00000556256 UNQ6494/PRO21346Q6UXR6 183 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 NME9Q86XW9 330 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 HDAC5Q9UQL6 1122 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 FRMD4BQ9Y2L6 1034 aa5.25□□□□□ -1.57
SCFD1-218ENST00000556256 TNPO3Q9Y5L0 923 aaKnown RBP5.25□□□□□ -1.57
SCFD1-218ENST00000556256 PIPSLA2A3N6 862 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 M0R2C6 588 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 ALDH1A2O94788 518 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 STK10O94804 968 aaKnown RBP5.24□□□□□ -1.57
SCFD1-218ENST00000556256 EPHA7Q15375 998 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 SP5Q6BEB4 398 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-218ENST00000556256 TEX101Q9BY14 249 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 PCIF1Q9H4Z3 704 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 TRIM39Q9HCM9 518 aa5.24□□□□□ -1.57
SCFD1-218ENST00000556256 OPHN1O60890 802 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 ZSCAN20P17040 1043 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-218ENST00000556256 RNASE9P60153 205 aaKnown RBP5.23□□□□□ -1.57
SCFD1-218ENST00000556256 GUCY1B3Q02153 619 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 DOK3Q7L591 496 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 GPRIN1Q7Z2K8 1008 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 KIAA1958Q8N8K9 716 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 PIK3C3Q8NEB9 887 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 PPP1R14CQ8TAE6 165 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 IL17RAQ96F46 866 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 NOL10Q9BSC4 688 aaKnown RBP5.23□□□□□ -1.57
SCFD1-218ENST00000556256 SPATA5L1Q9BVQ7 753 aa5.23□□□□□ -1.57
SCFD1-218ENST00000556256 ARHGEF17Q96PE2 2063 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 UNC119BA6NIH7 251 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 MAFGO15525 162 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 PRPF6O94906 941 aaKnown RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 APOL3O95236 402 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 C1RP00736 705 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 WNT3AP56704 352 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 NHLH2Q02577 135 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 CD69Q07108 199 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 TIGD7Q6NT04 549 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 MICALCLQ6ZW33 695 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 DDX53Q86TM3 631 aaKnown RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 SYT12Q8IV01 421 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 CHST14Q8NCH0 376 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 CPEB3Q8NE35 698 aaKnown RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 MYL10Q9BUA6 226 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 MRPL4Q9BYD3 311 aaKnown RBP5.22□□□□□ -1.57
SCFD1-218ENST00000556256 SAMD15Q9P1V8 674 aa5.22□□□□□ -1.57
SCFD1-218ENST00000556256 PTPDC1A2A3K4 754 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 MYADML2A6NDP7 307 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 PROB1E7EW31 1015 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 GLRX3O76003 335 aaKnown RBP5.21□□□□□ -1.58
SCFD1-218ENST00000556256 ESRRBO95718 433 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 MPLP40238 635 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 ADCY1Q08828 1119 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 FOXF2Q12947 444 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 ZNF174Q15697 407 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 ABHD17BQ5VST6 288 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 KIAA1841Q6NSI8 718 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 PLXDC1Q8IUK5 500 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 UNC5BQ8IZJ1 945 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 ADAM2Q99965 735 aa5.21□□□□□ -1.58
SCFD1-218ENST00000556256 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 H7C1D1 291 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 SLC9A1P19634 815 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 DDX6P26196 483 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 GZMKP49863 264 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 TP53BP2Q13625 1128 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 ESRP1Q6NXG1 681 aaKnown RBP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 BTNL9Q6UXG8 535 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms