RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 PRPF6O94906 941 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 NDUFA10O95299 355 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 GCNT3O95395 438 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 SLC25A27O95847 323 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 F11P03951 625 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 NR3C1P04150 777 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 MYBP10242 640 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 NR2F2P24468 414 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 EDNRBP24530 442 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 YWHABP31946 246 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 KRT83P78385 493 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 USP4Q13107 963 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 GAS6Q14393 721 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 MTF1Q14872 753 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 STXBP2Q15833 593 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 TREML2Q5T2D2 321 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 OTUD6AQ7L8S5 288 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 ARMC9Q7Z3E5 817 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 FAM178BQ8IXR5 827 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 C12orf56Q8IXR9 622 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 WHAMMQ8TF30 809 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 KCNN1Q92952 543 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 ATP6V0A1Q93050 837 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 EEF2KMTQ96G04 330 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 NTPCRQ9BSD7 190 aaKnown RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 C17orf75Q9HAS0 396 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 PLCB1Q9NQ66 1216 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 AGPAT5Q9NUQ2 364 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 MYO1AQ9UBC5 1043 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 ARMCX3Q9UH62 379 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-235ENST00000556082 KCNG1Q9UIX4 513 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 AGTPBP1Q9UPW5 1226 aa9.1□□□□□ -0.95
ATXN3-235ENST00000556082 PAPPA2Q9BXP8 1791 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 ASTN1O14525 1302 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 EIF3CLB5ME19 914 aaKnown RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 DDX39AO00148 427 aaKnown RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 NKRFO15226 690 aaKnown RBP eCLIP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 MAPK13O15264 365 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 HIP1RO75146 1068 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 AKAP3O75969 853 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 STBD1O95210 358 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 ATG7O95352 703 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 LCA5LO95447 670 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 PSAPP07602 524 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 TGFB3P10600 412 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 PLS3P13797 630 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SCP2P22307 547 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 CYLC1P35663 651 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 RTP1P59025 263 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 GTF2BQ00403 316 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 MOGSQ13724 837 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 PRKG1Q13976 671 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 ODR4Q5SWX8 454 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 ABHD15Q6UXT9 468 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SYT10Q6XYQ8 523 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 HS2ST1Q7LGA3 356 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 NEK11Q8NG66 645 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 GTF3C2Q8WUA4 911 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 HVCN1Q96D96 273 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 DRC1Q96MC2 740 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 EIF3CQ99613 913 aaKnown RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 CHP1Q99653 195 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SPATC1LQ9H0A9 340 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 GBP3Q9H0R5 595 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 ELP3Q9H9T3 547 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 JPH1Q9HDC5 661 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-235ENST00000556082 BTBD7Q9P203 1132 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 CEP72Q9P209 647 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 FBXL5Q9UKA1 691 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 MYO6Q9UM54 1294 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SAMM50Q9Y512 469 aa9.09□□□□□ -0.95
ATXN3-235ENST00000556082 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 KIF5CO60282 957 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 CNMDO75829 334 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 AFPP02771 609 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 EPB41P11171 864 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 NMT1P30419 496 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 ABCD1P33897 745 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 ARHGAP25P42331 645 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 KLK7P49862 253 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 GNG11P61952 73 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 HERVK_113P62684 666 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 IRX3P78415 501 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 PLS1Q14651 629 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 PPP2R5AQ15172 486 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 DPY19L2P1Q6NXN4 242 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 MIS18BP1Q6P0N0 1132 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms