RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TMEM259Q4ZIN3 620 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 XKR3Q5GH77 459 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 FAM43BQ6ZT52 329 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TRIM67Q6ZTA4 783 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 PIK3AP1Q6ZUJ8 805 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 RHPN2Q8IUC4 686 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 LINC01465Q8N7H1 131 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 COLGALT1Q8NBJ5 622 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 RDM1Q8NG50 284 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 ETNPPLQ8TBG4 499 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TLE6Q9H808 572 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TLR9Q9NR96 1032 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 CD207Q9UJ71 328 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
PSEN1-216ENST00000556066 A0A087WZ62 844 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 MBTPS2O43462 519 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PFKFB2O60825 505 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ALADP13716 330 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 LAG3P18627 525 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 CA8P35219 290 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PBX3P40426 434 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 AK2P54819 239 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ERVFC1P60507 584 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PSMC5P62195 406 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 FAM189BP81408 668 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 NHLH1Q02575 133 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 UBE3AQ05086 875 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ZP2Q05996 745 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 SMAD4Q13485 552 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 TARBP2Q15633 366 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 SMAD2Q15796 467 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 LONRF3Q496Y0 759 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PLPP4Q5VZY2 271 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PLA2G4FQ68DD2 849 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 TWF2Q6IBS0 349 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 MOXD1Q6UVY6 613 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ECHDC2Q86YB7 292 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 KSR1Q8IVT5 923 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ADHFE1Q8IWW8 467 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 FAM177A1Q8N128 213 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 LRRC43Q8N309 656 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 EFHBQ8N7U6 833 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 NECAB1Q8N987 351 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 SNX27Q96L92 541 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 NLRP4Q96MN2 994 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 MBOAT7Q96N66 472 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 CASD1Q96PB1 797 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 POP1Q99575 1024 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 FDXACB1Q9BRP7 624 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PHF20Q9BVI0 1012 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 GCOM2Q9BZD3 368 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 CWH43Q9H720 699 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ELAC1Q9H777 363 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ENTPD7Q9NQZ7 604 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 DACT1Q9NYF0 836 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 SUCLA2Q9P2R7 463 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 ORC3Q9UBD5 711 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PRKAG3Q9UGI9 489 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 PUF60Q9UHX1 559 aaKnown RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 BARX2Q9UMQ3 279 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-216ENST00000556066 STK36Q9NRP7 1315 aa7.5□□□□□ -1.21
PSEN1-216ENST00000556066 CFAP54Q96N23 3096 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 GVINP1Q7Z2Y8 2422 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 EML1O00423 815 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 DCXO43602 365 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 STBD1O95210 358 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CTDNEP1O95476 244 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 GCFC2P16383 781 aaKnown RBP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 SFPQP23246 707 aaKnown RBP eCLIP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 QARSP47897 775 aaKnown RBP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 POLGP54098 1239 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 NPEPPSP55786 919 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 ANAPC15P60006 121 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 RBM10P98175 930 aaKnown RBP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CDC42EP1Q00587 391 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 KRT17Q04695 432 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 NR5A1Q13285 461 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 PPP2R5CQ13362 524 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CLLU1OSQ5K130 101 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 NCAPH2Q6IBW4 605 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 LLGL2Q6P1M3 1020 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 KCNT2Q6UVM3 1135 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 B3GNT9Q6UX72 402 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 LRRC55Q6ZSA7 311 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 ANO5Q75V66 913 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CATSPER4Q7RTX7 472 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 WASF1Q92558 559 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CEP170P1Q96L14 293 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 FBXL18Q96ME1 805 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 FAM20AQ96MK3 541 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 ZNF558Q96NG5 402 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 TCF25Q9BQ70 676 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms